Gene : AUR62017573 C. quinoa v1.0
Defline:  (1 of 2) 2.4.1.182 - Lipid-A-disaccharide synthase Genomic Order:  90
Name:  ? AUR62017573 Secondary Identifier:  ? PAC:36291493
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa NAGLIPASYN-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62017573 0.5kb upstream 0.5kb upstream 4420 true C_Quinoa_Scaffold_3458: 1502412-1506831 Chenopodium quinoa
AUR62017573 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3458: 1506332-1506831 Chenopodium quinoa
AUR62017573 0.5kb downstream 0.5kb downstream 4420 true C_Quinoa_Scaffold_3458: 1501912-1506331 Chenopodium quinoa
AUR62017573 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3458: 1501912-1502411 Chenopodium quinoa
AUR62017573 1.0kb upstream 1.0kb upstream 4920 true C_Quinoa_Scaffold_3458: 1502412-1507331 Chenopodium quinoa
AUR62017573 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3458: 1506332-1507331 Chenopodium quinoa
AUR62017573 1.0kb downstream 1.0kb downstream 4920 true C_Quinoa_Scaffold_3458: 1501412-1506331 Chenopodium quinoa
AUR62017573 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3458: 1501412-1502411 Chenopodium quinoa
AUR62017573 2.0kb upstream 2.0kb upstream 5920 true C_Quinoa_Scaffold_3458: 1502412-1508331 Chenopodium quinoa
AUR62017573 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3458: 1506332-1508331 Chenopodium quinoa
AUR62017573 2.0kb downstream 2.0kb downstream 5920 true C_Quinoa_Scaffold_3458: 1500412-1506331 Chenopodium quinoa
AUR62017573 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3458: 1500412-1502411 Chenopodium quinoa
AUR62017573 5.0kb upstream 5.0kb upstream 8920 true C_Quinoa_Scaffold_3458: 1502412-1511331 Chenopodium quinoa
AUR62017573 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3458: 1506332-1511331 Chenopodium quinoa
AUR62017573 5.0kb downstream 5.0kb downstream 8920 true C_Quinoa_Scaffold_3458: 1497412-1506331 Chenopodium quinoa
AUR62017573 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3458: 1497412-1502411 Chenopodium quinoa
AUR62017573 10.0kb upstream 10.0kb upstream 13920 true C_Quinoa_Scaffold_3458: 1502412-1516331 Chenopodium quinoa
AUR62017573 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3458: 1506332-1516331 Chenopodium quinoa
AUR62017573 10.0kb downstream 10.0kb downstream 13920 true C_Quinoa_Scaffold_3458: 1492412-1506331 Chenopodium quinoa
AUR62017573 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3458: 1492412-1502411 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123747166 5271 Pentapetalae View MSA
122791278 5272 Eudicot View MSA
122042549 5273 Angiosperm View MSA
121345953 5274 Embryophyte View MSA
123380297 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain