Gene : AUR62006881 C. quinoa v1.0
Defline:  (1 of 44) PF03078 - ATHILA ORF-1 family (ATHILA) Genomic Order:  404
Name:  ? AUR62006881 Secondary Identifier:  ? PAC:36302322
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62006881 0.5kb upstream 0.5kb upstream 1993 true C_Quinoa_Scaffold_3429: 6040228-6042220 Chenopodium quinoa
AUR62006881 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3429: 6040228-6040727 Chenopodium quinoa
AUR62006881 0.5kb downstream 0.5kb downstream 1993 true C_Quinoa_Scaffold_3429: 6040728-6042720 Chenopodium quinoa
AUR62006881 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3429: 6042221-6042720 Chenopodium quinoa
AUR62006881 1.0kb upstream 1.0kb upstream 2493 true C_Quinoa_Scaffold_3429: 6039728-6042220 Chenopodium quinoa
AUR62006881 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3429: 6039728-6040727 Chenopodium quinoa
AUR62006881 1.0kb downstream 1.0kb downstream 2493 true C_Quinoa_Scaffold_3429: 6040728-6043220 Chenopodium quinoa
AUR62006881 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3429: 6042221-6043220 Chenopodium quinoa
AUR62006881 2.0kb upstream 2.0kb upstream 3493 true C_Quinoa_Scaffold_3429: 6038728-6042220 Chenopodium quinoa
AUR62006881 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3429: 6038728-6040727 Chenopodium quinoa
AUR62006881 2.0kb downstream 2.0kb downstream 3493 true C_Quinoa_Scaffold_3429: 6040728-6044220 Chenopodium quinoa
AUR62006881 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3429: 6042221-6044220 Chenopodium quinoa
AUR62006881 5.0kb upstream 5.0kb upstream 6493 true C_Quinoa_Scaffold_3429: 6035728-6042220 Chenopodium quinoa
AUR62006881 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3429: 6035728-6040727 Chenopodium quinoa
AUR62006881 5.0kb downstream 5.0kb downstream 6493 true C_Quinoa_Scaffold_3429: 6040728-6047220 Chenopodium quinoa
AUR62006881 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3429: 6042221-6047220 Chenopodium quinoa
AUR62006881 10.0kb upstream 10.0kb upstream 11493 true C_Quinoa_Scaffold_3429: 6030728-6042220 Chenopodium quinoa
AUR62006881 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3429: 6030728-6040727 Chenopodium quinoa
AUR62006881 10.0kb downstream 10.0kb downstream 11493 true C_Quinoa_Scaffold_3429: 6040728-6052220 Chenopodium quinoa
AUR62006881 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3429: 6042221-6052220 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121778789 5273 Angiosperm View MSA
123735914 5271 Pentapetalae View MSA
122769443 5272 Eudicot View MSA
121050473 5274 Embryophyte View MSA
123090591 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain