Gene : AUR62039602 C. quinoa v1.0
Defline:  (1 of 5) 4.6.1.16 - tRNA-intron lyase / tRNA splicing endonuclease Genomic Order:  41
Name:  ? AUR62039602 Secondary Identifier:  ? PAC:36304922
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-6689 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62039602 0.5kb upstream 0.5kb upstream 1151 true C_Quinoa_Scaffold_3498: 2211058-2212208 Chenopodium quinoa
AUR62039602 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3498: 2211058-2211557 Chenopodium quinoa
AUR62039602 0.5kb downstream 0.5kb downstream 1151 true C_Quinoa_Scaffold_3498: 2211558-2212708 Chenopodium quinoa
AUR62039602 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3498: 2212209-2212708 Chenopodium quinoa
AUR62039602 1.0kb upstream 1.0kb upstream 1651 true C_Quinoa_Scaffold_3498: 2210558-2212208 Chenopodium quinoa
AUR62039602 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3498: 2210558-2211557 Chenopodium quinoa
AUR62039602 1.0kb downstream 1.0kb downstream 1651 true C_Quinoa_Scaffold_3498: 2211558-2213208 Chenopodium quinoa
AUR62039602 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3498: 2212209-2213208 Chenopodium quinoa
AUR62039602 2.0kb upstream 2.0kb upstream 2651 true C_Quinoa_Scaffold_3498: 2209558-2212208 Chenopodium quinoa
AUR62039602 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3498: 2209558-2211557 Chenopodium quinoa
AUR62039602 2.0kb downstream 2.0kb downstream 2651 true C_Quinoa_Scaffold_3498: 2211558-2214208 Chenopodium quinoa
AUR62039602 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3498: 2212209-2214208 Chenopodium quinoa
AUR62039602 5.0kb upstream 5.0kb upstream 5651 true C_Quinoa_Scaffold_3498: 2206558-2212208 Chenopodium quinoa
AUR62039602 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3498: 2206558-2211557 Chenopodium quinoa
AUR62039602 5.0kb downstream 5.0kb downstream 5651 true C_Quinoa_Scaffold_3498: 2211558-2217208 Chenopodium quinoa
AUR62039602 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3498: 2212209-2217208 Chenopodium quinoa
AUR62039602 10.0kb upstream 10.0kb upstream 10651 true C_Quinoa_Scaffold_3498: 2201558-2212208 Chenopodium quinoa
AUR62039602 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3498: 2201558-2211557 Chenopodium quinoa
AUR62039602 10.0kb downstream 10.0kb downstream 10651 true C_Quinoa_Scaffold_3498: 2211558-2222208 Chenopodium quinoa
AUR62039602 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3498: 2212209-2222208 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041240 5273 Angiosperm View MSA
123739625 5271 Pentapetalae View MSA
122788641 5272 Eudicot View MSA
123429143 5275 Viridiplantae View MSA
121344093 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain