Gene : AUR62017340 C. quinoa v1.0
Defline:  (1 of 1) K04569 - copper chaperone for superoxide dismutase (CCS) Genomic Order:  162
Name:  ? AUR62017340 Secondary Identifier:  ? PAC:36294490
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa DETOX1-PWY Chenopodium quinoa pathologic  
Cquinoa DETOX1-PWY-1 Chenopodium quinoa pathologic  
Cquinoa PWY-6854 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62017340 0.5kb upstream 0.5kb upstream 8428 true C_Quinoa_Scaffold_3489: 2192817-2201244 Chenopodium quinoa
AUR62017340 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3489: 2192817-2193316 Chenopodium quinoa
AUR62017340 0.5kb downstream 0.5kb downstream 8428 true C_Quinoa_Scaffold_3489: 2193317-2201744 Chenopodium quinoa
AUR62017340 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3489: 2201245-2201744 Chenopodium quinoa
AUR62017340 1.0kb upstream 1.0kb upstream 8928 true C_Quinoa_Scaffold_3489: 2192317-2201244 Chenopodium quinoa
AUR62017340 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3489: 2192317-2193316 Chenopodium quinoa
AUR62017340 1.0kb downstream 1.0kb downstream 8928 true C_Quinoa_Scaffold_3489: 2193317-2202244 Chenopodium quinoa
AUR62017340 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3489: 2201245-2202244 Chenopodium quinoa
AUR62017340 2.0kb upstream 2.0kb upstream 9928 true C_Quinoa_Scaffold_3489: 2191317-2201244 Chenopodium quinoa
AUR62017340 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3489: 2191317-2193316 Chenopodium quinoa
AUR62017340 2.0kb downstream 2.0kb downstream 9928 true C_Quinoa_Scaffold_3489: 2193317-2203244 Chenopodium quinoa
AUR62017340 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3489: 2201245-2203244 Chenopodium quinoa
AUR62017340 5.0kb upstream 5.0kb upstream 12928 true C_Quinoa_Scaffold_3489: 2188317-2201244 Chenopodium quinoa
AUR62017340 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3489: 2188317-2193316 Chenopodium quinoa
AUR62017340 5.0kb downstream 5.0kb downstream 12928 true C_Quinoa_Scaffold_3489: 2193317-2206244 Chenopodium quinoa
AUR62017340 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3489: 2201245-2206244 Chenopodium quinoa
AUR62017340 10.0kb upstream 10.0kb upstream 17928 true C_Quinoa_Scaffold_3489: 2183317-2201244 Chenopodium quinoa
AUR62017340 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3489: 2183317-2193316 Chenopodium quinoa
AUR62017340 10.0kb downstream 10.0kb downstream 17928 true C_Quinoa_Scaffold_3489: 2193317-2211244 Chenopodium quinoa
AUR62017340 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3489: 2201245-2211244 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123739046 5271 Pentapetalae View MSA
122793199 5272 Eudicot View MSA
122046170 5273 Angiosperm View MSA
121346754 5274 Embryophyte View MSA
123425336 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain