Gene : AUR62017270 C. quinoa v1.0
Defline:  (1 of 2) K01956 - carbamoyl-phosphate synthase small subunit (carA, CPA1) Genomic Order:  92
Name:  ? AUR62017270 Secondary Identifier:  ? PAC:36294620
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa ARGSYNBSUB-PWY Chenopodium quinoa pathologic  
Cquinoa ARGSYN-PWY Chenopodium quinoa pathologic  
Cquinoa CITRULBIO-PWY Chenopodium quinoa pathologic  
Cquinoa GLUTAMINDEG-PWY Chenopodium quinoa pathologic  
Cquinoa PWY0-162 Chenopodium quinoa pathologic  
Cquinoa PWY-4984 Chenopodium quinoa pathologic  
Cquinoa PWY-5686 Chenopodium quinoa pathologic  
Cquinoa PWY-7211 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62017270 0.5kb upstream 0.5kb upstream 5074 true C_Quinoa_Scaffold_3489: 1150637-1155710 Chenopodium quinoa
AUR62017270 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3489: 1150637-1151136 Chenopodium quinoa
AUR62017270 0.5kb downstream 0.5kb downstream 5074 true C_Quinoa_Scaffold_3489: 1151137-1156210 Chenopodium quinoa
AUR62017270 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3489: 1155711-1156210 Chenopodium quinoa
AUR62017270 1.0kb upstream 1.0kb upstream 5574 true C_Quinoa_Scaffold_3489: 1150137-1155710 Chenopodium quinoa
AUR62017270 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3489: 1150137-1151136 Chenopodium quinoa
AUR62017270 1.0kb downstream 1.0kb downstream 5574 true C_Quinoa_Scaffold_3489: 1151137-1156710 Chenopodium quinoa
AUR62017270 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3489: 1155711-1156710 Chenopodium quinoa
AUR62017270 2.0kb upstream 2.0kb upstream 6574 true C_Quinoa_Scaffold_3489: 1149137-1155710 Chenopodium quinoa
AUR62017270 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3489: 1149137-1151136 Chenopodium quinoa
AUR62017270 2.0kb downstream 2.0kb downstream 6574 true C_Quinoa_Scaffold_3489: 1151137-1157710 Chenopodium quinoa
AUR62017270 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3489: 1155711-1157710 Chenopodium quinoa
AUR62017270 5.0kb upstream 5.0kb upstream 9574 true C_Quinoa_Scaffold_3489: 1146137-1155710 Chenopodium quinoa
AUR62017270 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3489: 1146137-1151136 Chenopodium quinoa
AUR62017270 5.0kb downstream 5.0kb downstream 9574 true C_Quinoa_Scaffold_3489: 1151137-1160710 Chenopodium quinoa
AUR62017270 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3489: 1155711-1160710 Chenopodium quinoa
AUR62017270 10.0kb upstream 10.0kb upstream 14574 true C_Quinoa_Scaffold_3489: 1141137-1155710 Chenopodium quinoa
AUR62017270 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3489: 1141137-1151136 Chenopodium quinoa
AUR62017270 10.0kb downstream 10.0kb downstream 14574 true C_Quinoa_Scaffold_3489: 1151137-1165710 Chenopodium quinoa
AUR62017270 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3489: 1155711-1165710 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123739104 5271 Pentapetalae View MSA
122788005 5272 Eudicot View MSA
122046797 5273 Angiosperm View MSA
121347244 5274 Embryophyte View MSA
123423822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain