Gene : AUR62016563 C. quinoa v1.0
Defline:  (1 of 2) 2.1.1.260 - rRNA small subunit pseudouridine methyltransferase Nep1 Genomic Order:  310
Name:  ? AUR62016563 Secondary Identifier:  ? PAC:36290319
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62016563 0.5kb upstream 0.5kb upstream 1956 true C_Quinoa_Scaffold_3514: 3640734-3642689 Chenopodium quinoa
AUR62016563 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3514: 3642190-3642689 Chenopodium quinoa
AUR62016563 0.5kb downstream 0.5kb downstream 1956 true C_Quinoa_Scaffold_3514: 3640234-3642189 Chenopodium quinoa
AUR62016563 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3514: 3640234-3640733 Chenopodium quinoa
AUR62016563 1.0kb upstream 1.0kb upstream 2456 true C_Quinoa_Scaffold_3514: 3640734-3643189 Chenopodium quinoa
AUR62016563 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3514: 3642190-3643189 Chenopodium quinoa
AUR62016563 1.0kb downstream 1.0kb downstream 2456 true C_Quinoa_Scaffold_3514: 3639734-3642189 Chenopodium quinoa
AUR62016563 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3514: 3639734-3640733 Chenopodium quinoa
AUR62016563 2.0kb upstream 2.0kb upstream 3456 true C_Quinoa_Scaffold_3514: 3640734-3644189 Chenopodium quinoa
AUR62016563 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3514: 3642190-3644189 Chenopodium quinoa
AUR62016563 2.0kb downstream 2.0kb downstream 3456 true C_Quinoa_Scaffold_3514: 3638734-3642189 Chenopodium quinoa
AUR62016563 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3514: 3638734-3640733 Chenopodium quinoa
AUR62016563 5.0kb upstream 5.0kb upstream 6456 true C_Quinoa_Scaffold_3514: 3640734-3647189 Chenopodium quinoa
AUR62016563 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3514: 3642190-3647189 Chenopodium quinoa
AUR62016563 5.0kb downstream 5.0kb downstream 6456 true C_Quinoa_Scaffold_3514: 3635734-3642189 Chenopodium quinoa
AUR62016563 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3514: 3635734-3640733 Chenopodium quinoa
AUR62016563 10.0kb upstream 10.0kb upstream 11456 true C_Quinoa_Scaffold_3514: 3640734-3652189 Chenopodium quinoa
AUR62016563 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3514: 3642190-3652189 Chenopodium quinoa
AUR62016563 10.0kb downstream 10.0kb downstream 11456 true C_Quinoa_Scaffold_3514: 3630734-3642189 Chenopodium quinoa
AUR62016563 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3514: 3630734-3640733 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123749345 5271 Pentapetalae View MSA
122789424 5272 Eudicot View MSA
122046063 5273 Angiosperm View MSA
121345370 5274 Embryophyte View MSA
123425050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain