Gene : AUR62040170 C. quinoa v1.0
Defline:  (1 of 5) 5.5.1.19 - Lycopene beta-cyclase Genomic Order:  18
Name:  ? AUR62040170 Secondary Identifier:  ? PAC:36296308
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa CAROTENOID-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-5943 Chenopodium quinoa pathologic  
Cquinoa PWY-5947 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62040170 0.5kb upstream 0.5kb upstream 7600 true C_Quinoa_Scaffold_3626: 551063-558662 Chenopodium quinoa
AUR62040170 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3626: 551063-551562 Chenopodium quinoa
AUR62040170 0.5kb downstream 0.5kb downstream 7600 true C_Quinoa_Scaffold_3626: 551563-559162 Chenopodium quinoa
AUR62040170 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3626: 558663-559162 Chenopodium quinoa
AUR62040170 1.0kb upstream 1.0kb upstream 8100 true C_Quinoa_Scaffold_3626: 550563-558662 Chenopodium quinoa
AUR62040170 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3626: 550563-551562 Chenopodium quinoa
AUR62040170 1.0kb downstream 1.0kb downstream 8100 true C_Quinoa_Scaffold_3626: 551563-559662 Chenopodium quinoa
AUR62040170 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3626: 558663-559662 Chenopodium quinoa
AUR62040170 2.0kb upstream 2.0kb upstream 9100 true C_Quinoa_Scaffold_3626: 549563-558662 Chenopodium quinoa
AUR62040170 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3626: 549563-551562 Chenopodium quinoa
AUR62040170 2.0kb downstream 2.0kb downstream 9100 true C_Quinoa_Scaffold_3626: 551563-560662 Chenopodium quinoa
AUR62040170 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3626: 558663-560662 Chenopodium quinoa
AUR62040170 5.0kb upstream 5.0kb upstream 12100 true C_Quinoa_Scaffold_3626: 546563-558662 Chenopodium quinoa
AUR62040170 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3626: 546563-551562 Chenopodium quinoa
AUR62040170 5.0kb downstream 5.0kb downstream 12100 true C_Quinoa_Scaffold_3626: 551563-563662 Chenopodium quinoa
AUR62040170 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3626: 558663-563662 Chenopodium quinoa
AUR62040170 10.0kb upstream 10.0kb upstream 17100 true C_Quinoa_Scaffold_3626: 541563-558662 Chenopodium quinoa
AUR62040170 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3626: 541563-551562 Chenopodium quinoa
AUR62040170 10.0kb downstream 10.0kb downstream 17100 true C_Quinoa_Scaffold_3626: 551563-568662 Chenopodium quinoa
AUR62040170 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3626: 558663-568662 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123739346 5271 Pentapetalae View MSA
122787287 5272 Eudicot View MSA
122042056 5273 Angiosperm View MSA
121350076 5274 Embryophyte View MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain