Gene : AUR62009400 C. quinoa v1.0
Defline:  (1 of 2) K00559 - sterol 24-C-methyltransferase (E2.1.1.41, SMT1, ERG6) Genomic Order:  359
Name:  ? AUR62009400 Secondary Identifier:  ? PAC:36297300
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-2541 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62009400 0.5kb upstream 0.5kb upstream 5424 true C_Quinoa_Scaffold_3674: 4942245-4947668 Chenopodium quinoa
AUR62009400 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3674: 4942245-4942744 Chenopodium quinoa
AUR62009400 0.5kb downstream 0.5kb downstream 5424 true C_Quinoa_Scaffold_3674: 4942745-4948168 Chenopodium quinoa
AUR62009400 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3674: 4947669-4948168 Chenopodium quinoa
AUR62009400 1.0kb upstream 1.0kb upstream 5924 true C_Quinoa_Scaffold_3674: 4941745-4947668 Chenopodium quinoa
AUR62009400 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3674: 4941745-4942744 Chenopodium quinoa
AUR62009400 1.0kb downstream 1.0kb downstream 5924 true C_Quinoa_Scaffold_3674: 4942745-4948668 Chenopodium quinoa
AUR62009400 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3674: 4947669-4948668 Chenopodium quinoa
AUR62009400 2.0kb upstream 2.0kb upstream 6924 true C_Quinoa_Scaffold_3674: 4940745-4947668 Chenopodium quinoa
AUR62009400 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3674: 4940745-4942744 Chenopodium quinoa
AUR62009400 2.0kb downstream 2.0kb downstream 6924 true C_Quinoa_Scaffold_3674: 4942745-4949668 Chenopodium quinoa
AUR62009400 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3674: 4947669-4949668 Chenopodium quinoa
AUR62009400 5.0kb upstream 5.0kb upstream 9924 true C_Quinoa_Scaffold_3674: 4937745-4947668 Chenopodium quinoa
AUR62009400 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3674: 4937745-4942744 Chenopodium quinoa
AUR62009400 5.0kb downstream 5.0kb downstream 9924 true C_Quinoa_Scaffold_3674: 4942745-4952668 Chenopodium quinoa
AUR62009400 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3674: 4947669-4952668 Chenopodium quinoa
AUR62009400 10.0kb upstream 10.0kb upstream 14924 true C_Quinoa_Scaffold_3674: 4932745-4947668 Chenopodium quinoa
AUR62009400 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3674: 4932745-4942744 Chenopodium quinoa
AUR62009400 10.0kb downstream 10.0kb downstream 14924 true C_Quinoa_Scaffold_3674: 4942745-4957668 Chenopodium quinoa
AUR62009400 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3674: 4947669-4957668 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041479 5273 Angiosperm View MSA
123743908 5271 Pentapetalae View MSA
122793455 5272 Eudicot View MSA
121345470 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain