Gene : AUR62009366 C. quinoa v1.0
Defline:  (1 of 3) K01850 - chorismate mutase (E5.4.99.5) Genomic Order:  325
Name:  ? AUR62009366 Secondary Identifier:  ? PAC:36297271
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-3461 Chenopodium quinoa pathologic  
Cquinoa PWY-3462 Chenopodium quinoa pathologic  
Cquinoa PWY-3481 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62009366 0.5kb upstream 0.5kb upstream 3231 true C_Quinoa_Scaffold_3674: 4613394-4616624 Chenopodium quinoa
AUR62009366 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3674: 4616125-4616624 Chenopodium quinoa
AUR62009366 0.5kb downstream 0.5kb downstream 3231 true C_Quinoa_Scaffold_3674: 4612894-4616124 Chenopodium quinoa
AUR62009366 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3674: 4612894-4613393 Chenopodium quinoa
AUR62009366 1.0kb upstream 1.0kb upstream 3731 true C_Quinoa_Scaffold_3674: 4613394-4617124 Chenopodium quinoa
AUR62009366 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3674: 4616125-4617124 Chenopodium quinoa
AUR62009366 1.0kb downstream 1.0kb downstream 3731 true C_Quinoa_Scaffold_3674: 4612394-4616124 Chenopodium quinoa
AUR62009366 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3674: 4612394-4613393 Chenopodium quinoa
AUR62009366 2.0kb upstream 2.0kb upstream 4731 true C_Quinoa_Scaffold_3674: 4613394-4618124 Chenopodium quinoa
AUR62009366 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3674: 4616125-4618124 Chenopodium quinoa
AUR62009366 2.0kb downstream 2.0kb downstream 4731 true C_Quinoa_Scaffold_3674: 4611394-4616124 Chenopodium quinoa
AUR62009366 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3674: 4611394-4613393 Chenopodium quinoa
AUR62009366 5.0kb upstream 5.0kb upstream 7731 true C_Quinoa_Scaffold_3674: 4613394-4621124 Chenopodium quinoa
AUR62009366 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3674: 4616125-4621124 Chenopodium quinoa
AUR62009366 5.0kb downstream 5.0kb downstream 7731 true C_Quinoa_Scaffold_3674: 4608394-4616124 Chenopodium quinoa
AUR62009366 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3674: 4608394-4613393 Chenopodium quinoa
AUR62009366 10.0kb upstream 10.0kb upstream 12731 true C_Quinoa_Scaffold_3674: 4613394-4626124 Chenopodium quinoa
AUR62009366 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3674: 4616125-4626124 Chenopodium quinoa
AUR62009366 10.0kb downstream 10.0kb downstream 12731 true C_Quinoa_Scaffold_3674: 4603394-4616124 Chenopodium quinoa
AUR62009366 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3674: 4603394-4613393 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123742772 5271 Pentapetalae View MSA
122797161 5272 Eudicot View MSA
122050627 5273 Angiosperm View MSA
121312036 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain