Gene : AUR62027823 C. quinoa v1.0
Defline:  (1 of 3) 1.1.1.86 - Ketol-acid reductoisomerase (NADP(+)) / Dihydroxyisovalerate dehydrogenase (isomerizing) Genomic Order:  110
Name:  ? AUR62027823 Secondary Identifier:  ? PAC:36299284
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa BRANCHED-CHAIN-AA-SYN-PWY Chenopodium quinoa pathologic  
Cquinoa ILEUSYN-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-3001 Chenopodium quinoa pathologic  
Cquinoa VALSYN-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62027823 0.5kb upstream 0.5kb upstream 11981 true C_Quinoa_Scaffold_3784: 2160246-2172226 Chenopodium quinoa
AUR62027823 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3784: 2160246-2160745 Chenopodium quinoa
AUR62027823 0.5kb downstream 0.5kb downstream 11981 true C_Quinoa_Scaffold_3784: 2160746-2172726 Chenopodium quinoa
AUR62027823 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3784: 2172227-2172726 Chenopodium quinoa
AUR62027823 1.0kb upstream 1.0kb upstream 12481 true C_Quinoa_Scaffold_3784: 2159746-2172226 Chenopodium quinoa
AUR62027823 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3784: 2159746-2160745 Chenopodium quinoa
AUR62027823 1.0kb downstream 1.0kb downstream 12481 true C_Quinoa_Scaffold_3784: 2160746-2173226 Chenopodium quinoa
AUR62027823 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3784: 2172227-2173226 Chenopodium quinoa
AUR62027823 2.0kb upstream 2.0kb upstream 13481 true C_Quinoa_Scaffold_3784: 2158746-2172226 Chenopodium quinoa
AUR62027823 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3784: 2158746-2160745 Chenopodium quinoa
AUR62027823 2.0kb downstream 2.0kb downstream 13481 true C_Quinoa_Scaffold_3784: 2160746-2174226 Chenopodium quinoa
AUR62027823 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3784: 2172227-2174226 Chenopodium quinoa
AUR62027823 5.0kb upstream 5.0kb upstream 16481 true C_Quinoa_Scaffold_3784: 2155746-2172226 Chenopodium quinoa
AUR62027823 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3784: 2155746-2160745 Chenopodium quinoa
AUR62027823 5.0kb downstream 5.0kb downstream 16481 true C_Quinoa_Scaffold_3784: 2160746-2177226 Chenopodium quinoa
AUR62027823 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3784: 2172227-2177226 Chenopodium quinoa
AUR62027823 10.0kb upstream 10.0kb upstream 21481 true C_Quinoa_Scaffold_3784: 2150746-2172226 Chenopodium quinoa
AUR62027823 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3784: 2150746-2160745 Chenopodium quinoa
AUR62027823 10.0kb downstream 10.0kb downstream 21481 true C_Quinoa_Scaffold_3784: 2160746-2182226 Chenopodium quinoa
AUR62027823 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3784: 2172227-2182226 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
123753150 5271 Pentapetalae View MSA
122797947 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain