Gene : AUR62017019 C. quinoa v1.0
Defline:  (1 of 1) PTHR11771//PTHR11771:SF56 - LIPOXYGENASE // SUBFAMILY NOT NAMED Genomic Order:  125
Name:  ? AUR62017019 Secondary Identifier:  ? PAC:36309825
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-5409 Chenopodium quinoa pathologic  
Cquinoa PWY-735 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62017019 0.5kb upstream 0.5kb upstream 3317 true C_Quinoa_Scaffold_3787: 1900508-1903824 Chenopodium quinoa
AUR62017019 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3787: 1903325-1903824 Chenopodium quinoa
AUR62017019 0.5kb downstream 0.5kb downstream 3317 true C_Quinoa_Scaffold_3787: 1900008-1903324 Chenopodium quinoa
AUR62017019 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3787: 1900008-1900507 Chenopodium quinoa
AUR62017019 1.0kb upstream 1.0kb upstream 3817 true C_Quinoa_Scaffold_3787: 1900508-1904324 Chenopodium quinoa
AUR62017019 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3787: 1903325-1904324 Chenopodium quinoa
AUR62017019 1.0kb downstream 1.0kb downstream 3817 true C_Quinoa_Scaffold_3787: 1899508-1903324 Chenopodium quinoa
AUR62017019 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3787: 1899508-1900507 Chenopodium quinoa
AUR62017019 2.0kb upstream 2.0kb upstream 4817 true C_Quinoa_Scaffold_3787: 1900508-1905324 Chenopodium quinoa
AUR62017019 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3787: 1903325-1905324 Chenopodium quinoa
AUR62017019 2.0kb downstream 2.0kb downstream 4817 true C_Quinoa_Scaffold_3787: 1898508-1903324 Chenopodium quinoa
AUR62017019 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3787: 1898508-1900507 Chenopodium quinoa
AUR62017019 5.0kb upstream 5.0kb upstream 7817 true C_Quinoa_Scaffold_3787: 1900508-1908324 Chenopodium quinoa
AUR62017019 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3787: 1903325-1908324 Chenopodium quinoa
AUR62017019 5.0kb downstream 5.0kb downstream 7817 true C_Quinoa_Scaffold_3787: 1895508-1903324 Chenopodium quinoa
AUR62017019 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3787: 1895508-1900507 Chenopodium quinoa
AUR62017019 10.0kb upstream 10.0kb upstream 12817 true C_Quinoa_Scaffold_3787: 1900508-1913324 Chenopodium quinoa
AUR62017019 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3787: 1903325-1913324 Chenopodium quinoa
AUR62017019 10.0kb downstream 10.0kb downstream 12817 true C_Quinoa_Scaffold_3787: 1890508-1903324 Chenopodium quinoa
AUR62017019 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3787: 1890508-1900507 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain