Gene : AUR62034364 C. quinoa v1.0

Defline:  (1 of 142) PF13966 - zinc-binding in reverse transcriptase (zf-RVT) Genomic Order:  62
Name:  ? AUR62034364 Secondary Identifier:  ? PAC:36302860

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62034364 0.5kb upstream 0.5kb upstream 1004 true C_Quinoa_Scaffold_2389: 3146082-3147085 Chenopodium quinoa
AUR62034364 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2389: 3146586-3147085 Chenopodium quinoa
AUR62034364 0.5kb downstream 0.5kb downstream 1004 true C_Quinoa_Scaffold_2389: 3145582-3146585 Chenopodium quinoa
AUR62034364 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2389: 3145582-3146081 Chenopodium quinoa
AUR62034364 1.0kb upstream 1.0kb upstream 1504 true C_Quinoa_Scaffold_2389: 3146082-3147585 Chenopodium quinoa
AUR62034364 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2389: 3146586-3147585 Chenopodium quinoa
AUR62034364 1.0kb downstream 1.0kb downstream 1504 true C_Quinoa_Scaffold_2389: 3145082-3146585 Chenopodium quinoa
AUR62034364 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2389: 3145082-3146081 Chenopodium quinoa
AUR62034364 2.0kb upstream 2.0kb upstream 2504 true C_Quinoa_Scaffold_2389: 3146082-3148585 Chenopodium quinoa
AUR62034364 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2389: 3146586-3148585 Chenopodium quinoa
AUR62034364 2.0kb downstream 2.0kb downstream 2504 true C_Quinoa_Scaffold_2389: 3144082-3146585 Chenopodium quinoa
AUR62034364 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2389: 3144082-3146081 Chenopodium quinoa
AUR62034364 5.0kb upstream 5.0kb upstream 5504 true C_Quinoa_Scaffold_2389: 3146082-3151585 Chenopodium quinoa
AUR62034364 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2389: 3146586-3151585 Chenopodium quinoa
AUR62034364 5.0kb downstream 5.0kb downstream 5504 true C_Quinoa_Scaffold_2389: 3141082-3146585 Chenopodium quinoa
AUR62034364 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2389: 3141082-3146081 Chenopodium quinoa
AUR62034364 10.0kb upstream 10.0kb upstream 10504 true C_Quinoa_Scaffold_2389: 3146082-3156585 Chenopodium quinoa
AUR62034364 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2389: 3146586-3156585 Chenopodium quinoa
AUR62034364 10.0kb downstream 10.0kb downstream 10504 true C_Quinoa_Scaffold_2389: 3136082-3146585 Chenopodium quinoa
AUR62034364 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2389: 3136082-3146081 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123753554 5271 Pentapetalae View MSA
122797941 5272 Eudicot View MSA
122051690 5273 Angiosperm View MSA
121351675 5274 Embryophyte View MSA
123428354 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain