Gene : AUR62010286 C. quinoa v1.0
Defline:  (1 of 2) K00058 - D-3-phosphoglycerate dehydrogenase (serA, PHGDH) Genomic Order:  329
Name:  ? AUR62010286 Secondary Identifier:  ? PAC:36322168
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa SER-GLYSYN-PWY Chenopodium quinoa pathologic  
Cquinoa SERSYN-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62010286 0.5kb upstream 0.5kb upstream 4768 true C_Quinoa_Scaffold_1257: 3575440-3580207 Chenopodium quinoa
AUR62010286 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1257: 3579708-3580207 Chenopodium quinoa
AUR62010286 0.5kb downstream 0.5kb downstream 4768 true C_Quinoa_Scaffold_1257: 3574940-3579707 Chenopodium quinoa
AUR62010286 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1257: 3574940-3575439 Chenopodium quinoa
AUR62010286 1.0kb upstream 1.0kb upstream 5268 true C_Quinoa_Scaffold_1257: 3575440-3580707 Chenopodium quinoa
AUR62010286 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1257: 3579708-3580707 Chenopodium quinoa
AUR62010286 1.0kb downstream 1.0kb downstream 5268 true C_Quinoa_Scaffold_1257: 3574440-3579707 Chenopodium quinoa
AUR62010286 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1257: 3574440-3575439 Chenopodium quinoa
AUR62010286 2.0kb upstream 2.0kb upstream 6268 true C_Quinoa_Scaffold_1257: 3575440-3581707 Chenopodium quinoa
AUR62010286 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1257: 3579708-3581707 Chenopodium quinoa
AUR62010286 2.0kb downstream 2.0kb downstream 6268 true C_Quinoa_Scaffold_1257: 3573440-3579707 Chenopodium quinoa
AUR62010286 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1257: 3573440-3575439 Chenopodium quinoa
AUR62010286 5.0kb upstream 5.0kb upstream 9268 true C_Quinoa_Scaffold_1257: 3575440-3584707 Chenopodium quinoa
AUR62010286 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1257: 3579708-3584707 Chenopodium quinoa
AUR62010286 5.0kb downstream 5.0kb downstream 9268 true C_Quinoa_Scaffold_1257: 3570440-3579707 Chenopodium quinoa
AUR62010286 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1257: 3570440-3575439 Chenopodium quinoa
AUR62010286 10.0kb upstream 10.0kb upstream 14268 true C_Quinoa_Scaffold_1257: 3575440-3589707 Chenopodium quinoa
AUR62010286 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1257: 3579708-3589707 Chenopodium quinoa
AUR62010286 10.0kb downstream 10.0kb downstream 14268 true C_Quinoa_Scaffold_1257: 3565440-3579707 Chenopodium quinoa
AUR62010286 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1257: 3565440-3575439 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123750282 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain