Gene : AUR62005055 C. quinoa v1.0
Defline:  (1 of 6) 1.1.1.25//4.2.1.10 - Shikimate dehydrogenase / Shikimate:NADP(+) oxidoreductase // 3-dehydroquinate dehydratase Genomic Order:  327
Name:  ? AUR62005055 Secondary Identifier:  ? PAC:36288101
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa ARO-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-6163 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62005055 0.5kb upstream 0.5kb upstream 9826 true C_Quinoa_Scaffold_3820: 9315463-9325288 Chenopodium quinoa
AUR62005055 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3820: 9315463-9315962 Chenopodium quinoa
AUR62005055 0.5kb downstream 0.5kb downstream 9826 true C_Quinoa_Scaffold_3820: 9315963-9325788 Chenopodium quinoa
AUR62005055 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3820: 9325289-9325788 Chenopodium quinoa
AUR62005055 1.0kb upstream 1.0kb upstream 10326 true C_Quinoa_Scaffold_3820: 9314963-9325288 Chenopodium quinoa
AUR62005055 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3820: 9314963-9315962 Chenopodium quinoa
AUR62005055 1.0kb downstream 1.0kb downstream 10326 true C_Quinoa_Scaffold_3820: 9315963-9326288 Chenopodium quinoa
AUR62005055 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3820: 9325289-9326288 Chenopodium quinoa
AUR62005055 2.0kb upstream 2.0kb upstream 11326 true C_Quinoa_Scaffold_3820: 9313963-9325288 Chenopodium quinoa
AUR62005055 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3820: 9313963-9315962 Chenopodium quinoa
AUR62005055 2.0kb downstream 2.0kb downstream 11326 true C_Quinoa_Scaffold_3820: 9315963-9327288 Chenopodium quinoa
AUR62005055 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3820: 9325289-9327288 Chenopodium quinoa
AUR62005055 5.0kb upstream 5.0kb upstream 14326 true C_Quinoa_Scaffold_3820: 9310963-9325288 Chenopodium quinoa
AUR62005055 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3820: 9310963-9315962 Chenopodium quinoa
AUR62005055 5.0kb downstream 5.0kb downstream 14326 true C_Quinoa_Scaffold_3820: 9315963-9330288 Chenopodium quinoa
AUR62005055 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3820: 9325289-9330288 Chenopodium quinoa
AUR62005055 10.0kb upstream 10.0kb upstream 19326 true C_Quinoa_Scaffold_3820: 9305963-9325288 Chenopodium quinoa
AUR62005055 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3820: 9305963-9315962 Chenopodium quinoa
AUR62005055 10.0kb downstream 10.0kb downstream 19326 true C_Quinoa_Scaffold_3820: 9315963-9335288 Chenopodium quinoa
AUR62005055 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3820: 9325289-9335288 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792526 5273 Angiosperm View MSA
123755263 5271 Pentapetalae View MSA
122798079 5272 Eudicot View MSA
121063750 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain