Gene : AUR62005057 C. quinoa v1.0
Defline:  (1 of 2) K13832 - 3-dehydroquinate dehydratase / shikimate dehydrogenase (aroDE, DHQ-SDH) Genomic Order:  329
Name:  ? AUR62005057 Secondary Identifier:  ? PAC:36288006
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa ARO-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-6163 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62005057 0.5kb upstream 0.5kb upstream 7628 true C_Quinoa_Scaffold_3820: 9329027-9336654 Chenopodium quinoa
AUR62005057 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3820: 9329027-9329526 Chenopodium quinoa
AUR62005057 0.5kb downstream 0.5kb downstream 7628 true C_Quinoa_Scaffold_3820: 9329527-9337154 Chenopodium quinoa
AUR62005057 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3820: 9336655-9337154 Chenopodium quinoa
AUR62005057 1.0kb upstream 1.0kb upstream 8128 true C_Quinoa_Scaffold_3820: 9328527-9336654 Chenopodium quinoa
AUR62005057 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3820: 9328527-9329526 Chenopodium quinoa
AUR62005057 1.0kb downstream 1.0kb downstream 8128 true C_Quinoa_Scaffold_3820: 9329527-9337654 Chenopodium quinoa
AUR62005057 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3820: 9336655-9337654 Chenopodium quinoa
AUR62005057 2.0kb upstream 2.0kb upstream 9128 true C_Quinoa_Scaffold_3820: 9327527-9336654 Chenopodium quinoa
AUR62005057 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3820: 9327527-9329526 Chenopodium quinoa
AUR62005057 2.0kb downstream 2.0kb downstream 9128 true C_Quinoa_Scaffold_3820: 9329527-9338654 Chenopodium quinoa
AUR62005057 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3820: 9336655-9338654 Chenopodium quinoa
AUR62005057 5.0kb upstream 5.0kb upstream 12128 true C_Quinoa_Scaffold_3820: 9324527-9336654 Chenopodium quinoa
AUR62005057 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3820: 9324527-9329526 Chenopodium quinoa
AUR62005057 5.0kb downstream 5.0kb downstream 12128 true C_Quinoa_Scaffold_3820: 9329527-9341654 Chenopodium quinoa
AUR62005057 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3820: 9336655-9341654 Chenopodium quinoa
AUR62005057 10.0kb upstream 10.0kb upstream 17128 true C_Quinoa_Scaffold_3820: 9319527-9336654 Chenopodium quinoa
AUR62005057 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3820: 9319527-9329526 Chenopodium quinoa
AUR62005057 10.0kb downstream 10.0kb downstream 17128 true C_Quinoa_Scaffold_3820: 9329527-9346654 Chenopodium quinoa
AUR62005057 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3820: 9336655-9346654 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123743031 5271 Pentapetalae View MSA
122788487 5272 Eudicot View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain