Gene : AUR62030363 C. quinoa v1.0
Defline:  (1 of 2) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) Genomic Order:  103
Name:  ? AUR62030363 Secondary Identifier:  ? PAC:36300632
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa CAROTENOID-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-5943 Chenopodium quinoa pathologic  
Cquinoa PWY-5947 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62030363 0.5kb upstream 0.5kb upstream 2006 true C_Quinoa_Scaffold_3970: 1752551-1754556 Chenopodium quinoa
AUR62030363 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3970: 1752551-1753050 Chenopodium quinoa
AUR62030363 0.5kb downstream 0.5kb downstream 2006 true C_Quinoa_Scaffold_3970: 1753051-1755056 Chenopodium quinoa
AUR62030363 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3970: 1754557-1755056 Chenopodium quinoa
AUR62030363 1.0kb upstream 1.0kb upstream 2506 true C_Quinoa_Scaffold_3970: 1752051-1754556 Chenopodium quinoa
AUR62030363 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3970: 1752051-1753050 Chenopodium quinoa
AUR62030363 1.0kb downstream 1.0kb downstream 2506 true C_Quinoa_Scaffold_3970: 1753051-1755556 Chenopodium quinoa
AUR62030363 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3970: 1754557-1755556 Chenopodium quinoa
AUR62030363 2.0kb upstream 2.0kb upstream 3506 true C_Quinoa_Scaffold_3970: 1751051-1754556 Chenopodium quinoa
AUR62030363 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3970: 1751051-1753050 Chenopodium quinoa
AUR62030363 2.0kb downstream 2.0kb downstream 3506 true C_Quinoa_Scaffold_3970: 1753051-1756556 Chenopodium quinoa
AUR62030363 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3970: 1754557-1756556 Chenopodium quinoa
AUR62030363 5.0kb upstream 5.0kb upstream 6506 true C_Quinoa_Scaffold_3970: 1748051-1754556 Chenopodium quinoa
AUR62030363 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3970: 1748051-1753050 Chenopodium quinoa
AUR62030363 5.0kb downstream 5.0kb downstream 6506 true C_Quinoa_Scaffold_3970: 1753051-1759556 Chenopodium quinoa
AUR62030363 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3970: 1754557-1759556 Chenopodium quinoa
AUR62030363 10.0kb upstream 10.0kb upstream 11506 true C_Quinoa_Scaffold_3970: 1743051-1754556 Chenopodium quinoa
AUR62030363 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3970: 1743051-1753050 Chenopodium quinoa
AUR62030363 10.0kb downstream 10.0kb downstream 11506 true C_Quinoa_Scaffold_3970: 1753051-1764556 Chenopodium quinoa
AUR62030363 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3970: 1754557-1764556 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123737595 5271 Pentapetalae View MSA
122786885 5272 Eudicot View MSA
122046204 5273 Angiosperm View MSA
121345644 5274 Embryophyte View MSA
123423874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain