Gene : AUR62030480 C. quinoa v1.0
Defline:  (1 of 2) 2.5.1.62 - Chlorophyll synthase Genomic Order:  80
Name:  ? AUR62030480 Secondary Identifier:  ? PAC:36319715
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-5064 Chenopodium quinoa pathologic  
Cquinoa PWY-5068 Chenopodium quinoa pathologic  
Cquinoa PWY-5086 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62030480 0.5kb upstream 0.5kb upstream 7630 true C_Quinoa_Scaffold_3973: 2186755-2194384 Chenopodium quinoa
AUR62030480 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3973: 2193885-2194384 Chenopodium quinoa
AUR62030480 0.5kb downstream 0.5kb downstream 7630 true C_Quinoa_Scaffold_3973: 2186255-2193884 Chenopodium quinoa
AUR62030480 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3973: 2186255-2186754 Chenopodium quinoa
AUR62030480 1.0kb upstream 1.0kb upstream 8130 true C_Quinoa_Scaffold_3973: 2186755-2194884 Chenopodium quinoa
AUR62030480 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3973: 2193885-2194884 Chenopodium quinoa
AUR62030480 1.0kb downstream 1.0kb downstream 8130 true C_Quinoa_Scaffold_3973: 2185755-2193884 Chenopodium quinoa
AUR62030480 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3973: 2185755-2186754 Chenopodium quinoa
AUR62030480 2.0kb upstream 2.0kb upstream 9130 true C_Quinoa_Scaffold_3973: 2186755-2195884 Chenopodium quinoa
AUR62030480 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3973: 2193885-2195884 Chenopodium quinoa
AUR62030480 2.0kb downstream 2.0kb downstream 9130 true C_Quinoa_Scaffold_3973: 2184755-2193884 Chenopodium quinoa
AUR62030480 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3973: 2184755-2186754 Chenopodium quinoa
AUR62030480 5.0kb upstream 5.0kb upstream 12130 true C_Quinoa_Scaffold_3973: 2186755-2198884 Chenopodium quinoa
AUR62030480 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3973: 2193885-2198884 Chenopodium quinoa
AUR62030480 5.0kb downstream 5.0kb downstream 12130 true C_Quinoa_Scaffold_3973: 2181755-2193884 Chenopodium quinoa
AUR62030480 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3973: 2181755-2186754 Chenopodium quinoa
AUR62030480 10.0kb upstream 10.0kb upstream 17130 true C_Quinoa_Scaffold_3973: 2186755-2203884 Chenopodium quinoa
AUR62030480 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3973: 2193885-2203884 Chenopodium quinoa
AUR62030480 10.0kb downstream 10.0kb downstream 17130 true C_Quinoa_Scaffold_3973: 2176755-2193884 Chenopodium quinoa
AUR62030480 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3973: 2176755-2186754 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123737432 5271 Pentapetalae View MSA
122786780 5272 Eudicot View MSA
122042815 5273 Angiosperm View MSA
121346314 5274 Embryophyte View MSA
123424294 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain