Gene : AUR62030456 C. quinoa v1.0
Defline:  (1 of 4) PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Genomic Order:  56
Name:  ? AUR62030456 Secondary Identifier:  ? PAC:36319685
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-7511 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62030456 0.5kb upstream 0.5kb upstream 7494 true C_Quinoa_Scaffold_3973: 1722585-1730078 Chenopodium quinoa
AUR62030456 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3973: 1722585-1723084 Chenopodium quinoa
AUR62030456 0.5kb downstream 0.5kb downstream 7494 true C_Quinoa_Scaffold_3973: 1723085-1730578 Chenopodium quinoa
AUR62030456 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3973: 1730079-1730578 Chenopodium quinoa
AUR62030456 1.0kb upstream 1.0kb upstream 7994 true C_Quinoa_Scaffold_3973: 1722085-1730078 Chenopodium quinoa
AUR62030456 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3973: 1722085-1723084 Chenopodium quinoa
AUR62030456 1.0kb downstream 1.0kb downstream 7994 true C_Quinoa_Scaffold_3973: 1723085-1731078 Chenopodium quinoa
AUR62030456 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3973: 1730079-1731078 Chenopodium quinoa
AUR62030456 2.0kb upstream 2.0kb upstream 8994 true C_Quinoa_Scaffold_3973: 1721085-1730078 Chenopodium quinoa
AUR62030456 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3973: 1721085-1723084 Chenopodium quinoa
AUR62030456 2.0kb downstream 2.0kb downstream 8994 true C_Quinoa_Scaffold_3973: 1723085-1732078 Chenopodium quinoa
AUR62030456 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3973: 1730079-1732078 Chenopodium quinoa
AUR62030456 5.0kb upstream 5.0kb upstream 11994 true C_Quinoa_Scaffold_3973: 1718085-1730078 Chenopodium quinoa
AUR62030456 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3973: 1718085-1723084 Chenopodium quinoa
AUR62030456 5.0kb downstream 5.0kb downstream 11994 true C_Quinoa_Scaffold_3973: 1723085-1735078 Chenopodium quinoa
AUR62030456 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3973: 1730079-1735078 Chenopodium quinoa
AUR62030456 10.0kb upstream 10.0kb upstream 16994 true C_Quinoa_Scaffold_3973: 1713085-1730078 Chenopodium quinoa
AUR62030456 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3973: 1713085-1723084 Chenopodium quinoa
AUR62030456 10.0kb downstream 10.0kb downstream 16994 true C_Quinoa_Scaffold_3973: 1723085-1740078 Chenopodium quinoa
AUR62030456 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3973: 1730079-1740078 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122792833 5272 Eudicot View MSA
123741557 5271 Pentapetalae View MSA
122042274 5273 Angiosperm View MSA
121349312 5274 Embryophyte View MSA
123381271 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain