Gene : AUR62012582 C. quinoa v1.0

Defline:  (1 of 4) K08901 - photosystem II oxygen-evolving enhancer protein 3 (psbQ) Genomic Order:  101
Name:  ? AUR62012582 Secondary Identifier:  ? PAC:36299626

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62012582 0.5kb upstream 0.5kb upstream 2229 true C_Quinoa_Scaffold_2715: 1614432-1616660 Chenopodium quinoa
AUR62012582 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2715: 1616161-1616660 Chenopodium quinoa
AUR62012582 0.5kb downstream 0.5kb downstream 2229 true C_Quinoa_Scaffold_2715: 1613932-1616160 Chenopodium quinoa
AUR62012582 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2715: 1613932-1614431 Chenopodium quinoa
AUR62012582 1.0kb upstream 1.0kb upstream 2729 true C_Quinoa_Scaffold_2715: 1614432-1617160 Chenopodium quinoa
AUR62012582 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2715: 1616161-1617160 Chenopodium quinoa
AUR62012582 1.0kb downstream 1.0kb downstream 2729 true C_Quinoa_Scaffold_2715: 1613432-1616160 Chenopodium quinoa
AUR62012582 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2715: 1613432-1614431 Chenopodium quinoa
AUR62012582 2.0kb upstream 2.0kb upstream 3729 true C_Quinoa_Scaffold_2715: 1614432-1618160 Chenopodium quinoa
AUR62012582 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2715: 1616161-1618160 Chenopodium quinoa
AUR62012582 2.0kb downstream 2.0kb downstream 3729 true C_Quinoa_Scaffold_2715: 1612432-1616160 Chenopodium quinoa
AUR62012582 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2715: 1612432-1614431 Chenopodium quinoa
AUR62012582 5.0kb upstream 5.0kb upstream 6729 true C_Quinoa_Scaffold_2715: 1614432-1621160 Chenopodium quinoa
AUR62012582 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2715: 1616161-1621160 Chenopodium quinoa
AUR62012582 5.0kb downstream 5.0kb downstream 6729 true C_Quinoa_Scaffold_2715: 1609432-1616160 Chenopodium quinoa
AUR62012582 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2715: 1609432-1614431 Chenopodium quinoa
AUR62012582 10.0kb upstream 10.0kb upstream 11729 true C_Quinoa_Scaffold_2715: 1614432-1626160 Chenopodium quinoa
AUR62012582 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2715: 1616161-1626160 Chenopodium quinoa
AUR62012582 10.0kb downstream 10.0kb downstream 11729 true C_Quinoa_Scaffold_2715: 1604432-1616160 Chenopodium quinoa
AUR62012582 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2715: 1604432-1614431 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123737093 5271 Pentapetalae View MSA
122790173 5272 Eudicot View MSA
122043772 5273 Angiosperm View MSA
121344186 5274 Embryophyte View MSA
123427004 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain