Gene : AUR62018368 C. quinoa v1.0
Defline:  (1 of 2) PTHR10277//PTHR10277:SF38 - HOMOCITRATE SYNTHASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  29
Name:  ? AUR62018368 Secondary Identifier:  ? PAC:36291222
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa LEU-DEG2-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62018368 0.5kb upstream 0.5kb upstream 6566 true C_Quinoa_Scaffold_4077: 498240-504805 Chenopodium quinoa
AUR62018368 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_4077: 498240-498739 Chenopodium quinoa
AUR62018368 0.5kb downstream 0.5kb downstream 6566 true C_Quinoa_Scaffold_4077: 498740-505305 Chenopodium quinoa
AUR62018368 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_4077: 504806-505305 Chenopodium quinoa
AUR62018368 1.0kb upstream 1.0kb upstream 7066 true C_Quinoa_Scaffold_4077: 497740-504805 Chenopodium quinoa
AUR62018368 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_4077: 497740-498739 Chenopodium quinoa
AUR62018368 1.0kb downstream 1.0kb downstream 7066 true C_Quinoa_Scaffold_4077: 498740-505805 Chenopodium quinoa
AUR62018368 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_4077: 504806-505805 Chenopodium quinoa
AUR62018368 2.0kb upstream 2.0kb upstream 8066 true C_Quinoa_Scaffold_4077: 496740-504805 Chenopodium quinoa
AUR62018368 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_4077: 496740-498739 Chenopodium quinoa
AUR62018368 2.0kb downstream 2.0kb downstream 8066 true C_Quinoa_Scaffold_4077: 498740-506805 Chenopodium quinoa
AUR62018368 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_4077: 504806-506805 Chenopodium quinoa
AUR62018368 5.0kb upstream 5.0kb upstream 11066 true C_Quinoa_Scaffold_4077: 493740-504805 Chenopodium quinoa
AUR62018368 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_4077: 493740-498739 Chenopodium quinoa
AUR62018368 5.0kb downstream 5.0kb downstream 11066 true C_Quinoa_Scaffold_4077: 498740-509805 Chenopodium quinoa
AUR62018368 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_4077: 504806-509805 Chenopodium quinoa
AUR62018368 10.0kb upstream 10.0kb upstream 16066 true C_Quinoa_Scaffold_4077: 488740-504805 Chenopodium quinoa
AUR62018368 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_4077: 488740-498739 Chenopodium quinoa
AUR62018368 10.0kb downstream 10.0kb downstream 16066 true C_Quinoa_Scaffold_4077: 498740-514805 Chenopodium quinoa
AUR62018368 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_4077: 504806-514805 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123743387 5271 Pentapetalae View MSA
122790168 5272 Eudicot View MSA
122045409 5273 Angiosperm View MSA
121347999 5274 Embryophyte View MSA
123426187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain