Gene : AUR62012745 C. quinoa v1.0
Defline:  (1 of 2) PTHR11946:SF7 - LEUCINE--TRNA LIGASE, MITOCHONDRIAL-RELATED Genomic Order:  264
Name:  ? AUR62012745 Secondary Identifier:  ? PAC:36299786
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa TRNA-CHARGING-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62012745 0.5kb upstream 0.5kb upstream 8374 true C_Quinoa_Scaffold_2715: 3565025-3573398 Chenopodium quinoa
AUR62012745 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2715: 3572899-3573398 Chenopodium quinoa
AUR62012745 0.5kb downstream 0.5kb downstream 8374 true C_Quinoa_Scaffold_2715: 3564525-3572898 Chenopodium quinoa
AUR62012745 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2715: 3564525-3565024 Chenopodium quinoa
AUR62012745 1.0kb upstream 1.0kb upstream 8874 true C_Quinoa_Scaffold_2715: 3565025-3573898 Chenopodium quinoa
AUR62012745 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2715: 3572899-3573898 Chenopodium quinoa
AUR62012745 1.0kb downstream 1.0kb downstream 8874 true C_Quinoa_Scaffold_2715: 3564025-3572898 Chenopodium quinoa
AUR62012745 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2715: 3564025-3565024 Chenopodium quinoa
AUR62012745 2.0kb upstream 2.0kb upstream 9874 true C_Quinoa_Scaffold_2715: 3565025-3574898 Chenopodium quinoa
AUR62012745 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2715: 3572899-3574898 Chenopodium quinoa
AUR62012745 2.0kb downstream 2.0kb downstream 9874 true C_Quinoa_Scaffold_2715: 3563025-3572898 Chenopodium quinoa
AUR62012745 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2715: 3563025-3565024 Chenopodium quinoa
AUR62012745 5.0kb upstream 5.0kb upstream 12874 true C_Quinoa_Scaffold_2715: 3565025-3577898 Chenopodium quinoa
AUR62012745 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2715: 3572899-3577898 Chenopodium quinoa
AUR62012745 5.0kb downstream 5.0kb downstream 12874 true C_Quinoa_Scaffold_2715: 3560025-3572898 Chenopodium quinoa
AUR62012745 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2715: 3560025-3565024 Chenopodium quinoa
AUR62012745 10.0kb upstream 10.0kb upstream 17874 true C_Quinoa_Scaffold_2715: 3565025-3582898 Chenopodium quinoa
AUR62012745 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2715: 3572899-3582898 Chenopodium quinoa
AUR62012745 10.0kb downstream 10.0kb downstream 17874 true C_Quinoa_Scaffold_2715: 3555025-3572898 Chenopodium quinoa
AUR62012745 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2715: 3555025-3565024 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041369 5273 Angiosperm View MSA
123749958 5271 Pentapetalae View MSA
122789048 5272 Eudicot View MSA
121347479 5274 Embryophyte View MSA
123424257 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain