Gene : AUR62042589 C. quinoa v1.0
Defline:  (1 of 1) PTHR10836:SF39 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPB, CHLOROPLASTIC Genomic Order:  15
Name:  ? AUR62042589 Secondary Identifier:  ? PAC:36282402
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa CALVIN-PWY Chenopodium quinoa pathologic  
Cquinoa PHOTOALL-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62042589 0.5kb upstream 0.5kb upstream 6295 true C_Quinoa_Scaffold_4132: 143242-149536 Chenopodium quinoa
AUR62042589 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_4132: 149037-149536 Chenopodium quinoa
AUR62042589 0.5kb downstream 0.5kb downstream 6295 true C_Quinoa_Scaffold_4132: 142742-149036 Chenopodium quinoa
AUR62042589 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_4132: 142742-143241 Chenopodium quinoa
AUR62042589 1.0kb upstream 1.0kb upstream 6795 true C_Quinoa_Scaffold_4132: 143242-150036 Chenopodium quinoa
AUR62042589 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_4132: 149037-150036 Chenopodium quinoa
AUR62042589 1.0kb downstream 1.0kb downstream 6795 true C_Quinoa_Scaffold_4132: 142242-149036 Chenopodium quinoa
AUR62042589 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_4132: 142242-143241 Chenopodium quinoa
AUR62042589 2.0kb upstream 2.0kb upstream 7795 true C_Quinoa_Scaffold_4132: 143242-151036 Chenopodium quinoa
AUR62042589 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_4132: 149037-151036 Chenopodium quinoa
AUR62042589 2.0kb downstream 2.0kb downstream 7795 true C_Quinoa_Scaffold_4132: 141242-149036 Chenopodium quinoa
AUR62042589 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_4132: 141242-143241 Chenopodium quinoa
AUR62042589 5.0kb upstream 5.0kb upstream 10795 true C_Quinoa_Scaffold_4132: 143242-154036 Chenopodium quinoa
AUR62042589 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_4132: 149037-154036 Chenopodium quinoa
AUR62042589 5.0kb downstream 5.0kb downstream 10795 true C_Quinoa_Scaffold_4132: 138242-149036 Chenopodium quinoa
AUR62042589 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_4132: 138242-143241 Chenopodium quinoa
AUR62042589 10.0kb upstream 10.0kb upstream 15795 true C_Quinoa_Scaffold_4132: 143242-159036 Chenopodium quinoa
AUR62042589 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_4132: 149037-159036 Chenopodium quinoa
AUR62042589 10.0kb downstream 10.0kb downstream 15795 true C_Quinoa_Scaffold_4132: 133242-149036 Chenopodium quinoa
AUR62042589 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_4132: 133242-143241 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123746514 5271 Pentapetalae View MSA
122796484 5272 Eudicot View MSA
122047323 5273 Angiosperm View MSA
121310728 5274 Embryophyte View MSA
123425156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain