Gene : AUR62038479 C. quinoa v1.0
Defline:  (1 of 2) PTHR11680:SF7 - SERINE HYDROXYMETHYLTRANSFERASE 6-RELATED Genomic Order:  23
Name:  ? AUR62038479 Secondary Identifier:  ? PAC:36311031
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa GLYSYN-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-2161 Chenopodium quinoa pathologic  
Cquinoa PWY-3841 Chenopodium quinoa pathologic  
Cquinoa SER-GLYSYN-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62038479 0.5kb upstream 0.5kb upstream 5202 true C_Quinoa_Scaffold_4120: 1866209-1871410 Chenopodium quinoa
AUR62038479 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_4120: 1870911-1871410 Chenopodium quinoa
AUR62038479 0.5kb downstream 0.5kb downstream 5202 true C_Quinoa_Scaffold_4120: 1865709-1870910 Chenopodium quinoa
AUR62038479 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_4120: 1865709-1866208 Chenopodium quinoa
AUR62038479 1.0kb upstream 1.0kb upstream 5702 true C_Quinoa_Scaffold_4120: 1866209-1871910 Chenopodium quinoa
AUR62038479 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_4120: 1870911-1871910 Chenopodium quinoa
AUR62038479 1.0kb downstream 1.0kb downstream 5702 true C_Quinoa_Scaffold_4120: 1865209-1870910 Chenopodium quinoa
AUR62038479 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_4120: 1865209-1866208 Chenopodium quinoa
AUR62038479 2.0kb upstream 2.0kb upstream 6702 true C_Quinoa_Scaffold_4120: 1866209-1872910 Chenopodium quinoa
AUR62038479 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_4120: 1870911-1872910 Chenopodium quinoa
AUR62038479 2.0kb downstream 2.0kb downstream 6702 true C_Quinoa_Scaffold_4120: 1864209-1870910 Chenopodium quinoa
AUR62038479 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_4120: 1864209-1866208 Chenopodium quinoa
AUR62038479 5.0kb upstream 5.0kb upstream 9702 true C_Quinoa_Scaffold_4120: 1866209-1875910 Chenopodium quinoa
AUR62038479 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_4120: 1870911-1875910 Chenopodium quinoa
AUR62038479 5.0kb downstream 5.0kb downstream 9702 true C_Quinoa_Scaffold_4120: 1861209-1870910 Chenopodium quinoa
AUR62038479 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_4120: 1861209-1866208 Chenopodium quinoa
AUR62038479 10.0kb upstream 10.0kb upstream 14702 true C_Quinoa_Scaffold_4120: 1866209-1880910 Chenopodium quinoa
AUR62038479 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_4120: 1870911-1880910 Chenopodium quinoa
AUR62038479 10.0kb downstream 10.0kb downstream 14702 true C_Quinoa_Scaffold_4120: 1856209-1870910 Chenopodium quinoa
AUR62038479 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_4120: 1856209-1866208 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123741866 5271 Pentapetalae View MSA
122787051 5272 Eudicot View MSA
122046261 5273 Angiosperm View MSA
121345900 5274 Embryophyte View MSA
123426459 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain