Gene : AUR62038499 C. quinoa v1.0
Defline:  (1 of 5) 6.1.1.21 - Histidine--tRNA ligase / Histidyl-tRNA synthetase Genomic Order:  43
Name:  ? AUR62038499 Secondary Identifier:  ? PAC:36311054
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa TRNA-CHARGING-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62038499 0.5kb upstream 0.5kb upstream 7825 true C_Quinoa_Scaffold_4120: 3867160-3874984 Chenopodium quinoa
AUR62038499 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_4120: 3867160-3867659 Chenopodium quinoa
AUR62038499 0.5kb downstream 0.5kb downstream 7825 true C_Quinoa_Scaffold_4120: 3867660-3875484 Chenopodium quinoa
AUR62038499 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_4120: 3874985-3875484 Chenopodium quinoa
AUR62038499 1.0kb upstream 1.0kb upstream 8325 true C_Quinoa_Scaffold_4120: 3866660-3874984 Chenopodium quinoa
AUR62038499 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_4120: 3866660-3867659 Chenopodium quinoa
AUR62038499 1.0kb downstream 1.0kb downstream 8325 true C_Quinoa_Scaffold_4120: 3867660-3875984 Chenopodium quinoa
AUR62038499 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_4120: 3874985-3875984 Chenopodium quinoa
AUR62038499 2.0kb upstream 2.0kb upstream 9325 true C_Quinoa_Scaffold_4120: 3865660-3874984 Chenopodium quinoa
AUR62038499 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_4120: 3865660-3867659 Chenopodium quinoa
AUR62038499 2.0kb downstream 2.0kb downstream 9325 true C_Quinoa_Scaffold_4120: 3867660-3876984 Chenopodium quinoa
AUR62038499 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_4120: 3874985-3876984 Chenopodium quinoa
AUR62038499 5.0kb upstream 5.0kb upstream 12325 true C_Quinoa_Scaffold_4120: 3862660-3874984 Chenopodium quinoa
AUR62038499 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_4120: 3862660-3867659 Chenopodium quinoa
AUR62038499 5.0kb downstream 5.0kb downstream 12325 true C_Quinoa_Scaffold_4120: 3867660-3879984 Chenopodium quinoa
AUR62038499 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_4120: 3874985-3879984 Chenopodium quinoa
AUR62038499 10.0kb upstream 10.0kb upstream 17325 true C_Quinoa_Scaffold_4120: 3857660-3874984 Chenopodium quinoa
AUR62038499 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_4120: 3857660-3867659 Chenopodium quinoa
AUR62038499 10.0kb downstream 10.0kb downstream 17325 true C_Quinoa_Scaffold_4120: 3867660-3884984 Chenopodium quinoa
AUR62038499 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_4120: 3874985-3884984 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779866 5273 Angiosperm View MSA
123744374 5271 Pentapetalae View MSA
122771051 5272 Eudicot View MSA
121051502 5274 Embryophyte View MSA
123091588 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain