Gene : AUR62043927 C. quinoa v1.0
Defline:  (1 of 5) 6.1.1.1 - Tyrosine--tRNA ligase / Tyrosyl-tRNA synthetase Genomic Order:  1
Name:  ? AUR62043927 Secondary Identifier:  ? PAC:36308770
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa TRNA-CHARGING-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62043927 0.5kb upstream 0.5kb upstream 4522 true C_Quinoa_Scaffold_4100: 16659-21180 Chenopodium quinoa
AUR62043927 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_4100: 16659-17158 Chenopodium quinoa
AUR62043927 0.5kb downstream 0.5kb downstream 4522 true C_Quinoa_Scaffold_4100: 17159-21680 Chenopodium quinoa
AUR62043927 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_4100: 21181-21680 Chenopodium quinoa
AUR62043927 1.0kb upstream 1.0kb upstream 5022 true C_Quinoa_Scaffold_4100: 16159-21180 Chenopodium quinoa
AUR62043927 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_4100: 16159-17158 Chenopodium quinoa
AUR62043927 1.0kb downstream 1.0kb downstream 5022 true C_Quinoa_Scaffold_4100: 17159-22180 Chenopodium quinoa
AUR62043927 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_4100: 21181-22180 Chenopodium quinoa
AUR62043927 2.0kb upstream 2.0kb upstream 6022 true C_Quinoa_Scaffold_4100: 15159-21180 Chenopodium quinoa
AUR62043927 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_4100: 15159-17158 Chenopodium quinoa
AUR62043927 2.0kb downstream 2.0kb downstream 6022 true C_Quinoa_Scaffold_4100: 17159-23180 Chenopodium quinoa
AUR62043927 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_4100: 21181-23180 Chenopodium quinoa
AUR62043927 5.0kb upstream 5.0kb upstream 9022 true C_Quinoa_Scaffold_4100: 12159-21180 Chenopodium quinoa
AUR62043927 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_4100: 12159-17158 Chenopodium quinoa
AUR62043927 5.0kb downstream 5.0kb downstream 9022 true C_Quinoa_Scaffold_4100: 17159-26180 Chenopodium quinoa
AUR62043927 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_4100: 21181-26180 Chenopodium quinoa
AUR62043927 10.0kb upstream 10.0kb upstream 14022 true C_Quinoa_Scaffold_4100: 7159-21180 Chenopodium quinoa
AUR62043927 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_4100: 7159-17158 Chenopodium quinoa
AUR62043927 10.0kb downstream 10.0kb downstream 14022 true C_Quinoa_Scaffold_4100: 17159-31180 Chenopodium quinoa
AUR62043927 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_4100: 21181-31180 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041140 5273 Angiosperm View MSA
123747436 5271 Pentapetalae View MSA
122790144 5272 Eudicot View MSA
121344192 5274 Embryophyte View MSA
123424631 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain