Gene : AUR62044747 C. quinoa v1.0
Defline:  (1 of 2) PTHR30128//PTHR30128:SF8 - OUTER MEMBRANE PROTEIN, OMPA-RELATED // PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1 Genomic Order:  1
Name:  ? AUR62044747 Secondary Identifier:  ? PAC:36300370
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PHOTOALL-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-101 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62044747 0.5kb upstream 0.5kb upstream 1291 true C_Quinoa_Scaffold_4204: 11905-13195 Chenopodium quinoa
AUR62044747 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_4204: 11905-12404 Chenopodium quinoa
AUR62044747 0.5kb downstream 0.5kb downstream 1291 true C_Quinoa_Scaffold_4204: 12405-13695 Chenopodium quinoa
AUR62044747 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_4204: 13196-13695 Chenopodium quinoa
AUR62044747 1.0kb upstream 1.0kb upstream 1791 true C_Quinoa_Scaffold_4204: 11405-13195 Chenopodium quinoa
AUR62044747 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_4204: 11405-12404 Chenopodium quinoa
AUR62044747 1.0kb downstream 1.0kb downstream 1791 true C_Quinoa_Scaffold_4204: 12405-14195 Chenopodium quinoa
AUR62044747 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_4204: 13196-14195 Chenopodium quinoa
AUR62044747 2.0kb upstream 2.0kb upstream 2791 true C_Quinoa_Scaffold_4204: 10405-13195 Chenopodium quinoa
AUR62044747 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_4204: 10405-12404 Chenopodium quinoa
AUR62044747 2.0kb downstream 2.0kb downstream 2791 true C_Quinoa_Scaffold_4204: 12405-15195 Chenopodium quinoa
AUR62044747 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_4204: 13196-15195 Chenopodium quinoa
AUR62044747 5.0kb upstream 5.0kb upstream 5791 true C_Quinoa_Scaffold_4204: 7405-13195 Chenopodium quinoa
AUR62044747 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_4204: 7405-12404 Chenopodium quinoa
AUR62044747 5.0kb downstream 5.0kb downstream 5791 true C_Quinoa_Scaffold_4204: 12405-18195 Chenopodium quinoa
AUR62044747 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_4204: 13196-18195 Chenopodium quinoa
AUR62044747 10.0kb upstream 10.0kb upstream 10791 true C_Quinoa_Scaffold_4204: 2405-13195 Chenopodium quinoa
AUR62044747 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_4204: 2405-12404 Chenopodium quinoa
AUR62044747 10.0kb downstream 10.0kb downstream 10791 true C_Quinoa_Scaffold_4204: 12405-23195 Chenopodium quinoa
AUR62044747 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_4204: 13196-23195 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029302 5273 Angiosperm View MSA
123753251 5271 Pentapetalae View MSA
122775013 5272 Eudicot View MSA
121350541 5274 Embryophyte View MSA
123381782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain