Gene : AUR62021672 C. quinoa v1.0
Defline:  (1 of 2) PTHR10617:SF116 - GERANYLGERANYL DIPHOSPHATE REDUCTASE, CHLOROPLASTIC Genomic Order:  145
Name:  ? AUR62021672 Secondary Identifier:  ? PAC:36322787
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-5063 Chenopodium quinoa pathologic  
Cquinoa PWY-5064 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62021672 0.5kb upstream 0.5kb upstream 3322 true C_Quinoa_Scaffold_1675: 2225079-2228400 Chenopodium quinoa
AUR62021672 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1675: 2225079-2225578 Chenopodium quinoa
AUR62021672 0.5kb downstream 0.5kb downstream 3322 true C_Quinoa_Scaffold_1675: 2225579-2228900 Chenopodium quinoa
AUR62021672 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1675: 2228401-2228900 Chenopodium quinoa
AUR62021672 1.0kb upstream 1.0kb upstream 3822 true C_Quinoa_Scaffold_1675: 2224579-2228400 Chenopodium quinoa
AUR62021672 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1675: 2224579-2225578 Chenopodium quinoa
AUR62021672 1.0kb downstream 1.0kb downstream 3822 true C_Quinoa_Scaffold_1675: 2225579-2229400 Chenopodium quinoa
AUR62021672 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1675: 2228401-2229400 Chenopodium quinoa
AUR62021672 2.0kb upstream 2.0kb upstream 4822 true C_Quinoa_Scaffold_1675: 2223579-2228400 Chenopodium quinoa
AUR62021672 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1675: 2223579-2225578 Chenopodium quinoa
AUR62021672 2.0kb downstream 2.0kb downstream 4822 true C_Quinoa_Scaffold_1675: 2225579-2230400 Chenopodium quinoa
AUR62021672 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1675: 2228401-2230400 Chenopodium quinoa
AUR62021672 5.0kb upstream 5.0kb upstream 7822 true C_Quinoa_Scaffold_1675: 2220579-2228400 Chenopodium quinoa
AUR62021672 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1675: 2220579-2225578 Chenopodium quinoa
AUR62021672 5.0kb downstream 5.0kb downstream 7822 true C_Quinoa_Scaffold_1675: 2225579-2233400 Chenopodium quinoa
AUR62021672 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1675: 2228401-2233400 Chenopodium quinoa
AUR62021672 10.0kb upstream 10.0kb upstream 12822 true C_Quinoa_Scaffold_1675: 2215579-2228400 Chenopodium quinoa
AUR62021672 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1675: 2215579-2225578 Chenopodium quinoa
AUR62021672 10.0kb downstream 10.0kb downstream 12822 true C_Quinoa_Scaffold_1675: 2225579-2238400 Chenopodium quinoa
AUR62021672 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1675: 2228401-2238400 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123742493 5271 Pentapetalae View MSA
122794040 5272 Eudicot View MSA
122041542 5273 Angiosperm View MSA
121345615 5274 Embryophyte View MSA
123424772 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain