Gene : AUR62004401 C. quinoa v1.0
Defline:  (1 of 2) PTHR12358//PTHR12358:SF43 - SPHINGOSINE KINASE // SPHINGOID LONG-CHAIN BASES KINASE 2, MITOCHONDRIAL Genomic Order:  280
Name:  ? AUR62004401 Secondary Identifier:  ? PAC:36319334
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-7039 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62004401 0.5kb upstream 0.5kb upstream 4886 true C_Quinoa_Scaffold_4250: 2766801-2771686 Chenopodium quinoa
AUR62004401 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_4250: 2771187-2771686 Chenopodium quinoa
AUR62004401 0.5kb downstream 0.5kb downstream 4886 true C_Quinoa_Scaffold_4250: 2766301-2771186 Chenopodium quinoa
AUR62004401 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_4250: 2766301-2766800 Chenopodium quinoa
AUR62004401 1.0kb upstream 1.0kb upstream 5386 true C_Quinoa_Scaffold_4250: 2766801-2772186 Chenopodium quinoa
AUR62004401 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_4250: 2771187-2772186 Chenopodium quinoa
AUR62004401 1.0kb downstream 1.0kb downstream 5386 true C_Quinoa_Scaffold_4250: 2765801-2771186 Chenopodium quinoa
AUR62004401 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_4250: 2765801-2766800 Chenopodium quinoa
AUR62004401 2.0kb upstream 2.0kb upstream 6386 true C_Quinoa_Scaffold_4250: 2766801-2773186 Chenopodium quinoa
AUR62004401 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_4250: 2771187-2773186 Chenopodium quinoa
AUR62004401 2.0kb downstream 2.0kb downstream 6386 true C_Quinoa_Scaffold_4250: 2764801-2771186 Chenopodium quinoa
AUR62004401 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_4250: 2764801-2766800 Chenopodium quinoa
AUR62004401 5.0kb upstream 5.0kb upstream 9386 true C_Quinoa_Scaffold_4250: 2766801-2776186 Chenopodium quinoa
AUR62004401 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_4250: 2771187-2776186 Chenopodium quinoa
AUR62004401 5.0kb downstream 5.0kb downstream 9386 true C_Quinoa_Scaffold_4250: 2761801-2771186 Chenopodium quinoa
AUR62004401 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_4250: 2761801-2766800 Chenopodium quinoa
AUR62004401 10.0kb upstream 10.0kb upstream 14386 true C_Quinoa_Scaffold_4250: 2766801-2781186 Chenopodium quinoa
AUR62004401 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_4250: 2771187-2781186 Chenopodium quinoa
AUR62004401 10.0kb downstream 10.0kb downstream 14386 true C_Quinoa_Scaffold_4250: 2756801-2771186 Chenopodium quinoa
AUR62004401 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_4250: 2756801-2766800 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123747106 5271 Pentapetalae View MSA
122789016 5272 Eudicot View MSA
122043667 5273 Angiosperm View MSA
121344203 5274 Embryophyte View MSA
123380000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain