Gene : AUR62038171 C. quinoa v1.0
Defline:  (1 of 2) K16274 - E3 ubiquitin-protein ligase AIP2 [EC:6.3.2.19] (AIP2) Genomic Order:  11
Name:  ? AUR62038171 Secondary Identifier:  ? PAC:36320866
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-7511 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62038171 0.5kb upstream 0.5kb upstream 11030 true C_Quinoa_Scaffold_4336: 611739-622768 Chenopodium quinoa
AUR62038171 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_4336: 622269-622768 Chenopodium quinoa
AUR62038171 0.5kb downstream 0.5kb downstream 11030 true C_Quinoa_Scaffold_4336: 611239-622268 Chenopodium quinoa
AUR62038171 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_4336: 611239-611738 Chenopodium quinoa
AUR62038171 1.0kb upstream 1.0kb upstream 11530 true C_Quinoa_Scaffold_4336: 611739-623268 Chenopodium quinoa
AUR62038171 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_4336: 622269-623268 Chenopodium quinoa
AUR62038171 1.0kb downstream 1.0kb downstream 11530 true C_Quinoa_Scaffold_4336: 610739-622268 Chenopodium quinoa
AUR62038171 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_4336: 610739-611738 Chenopodium quinoa
AUR62038171 2.0kb upstream 2.0kb upstream 12530 true C_Quinoa_Scaffold_4336: 611739-624268 Chenopodium quinoa
AUR62038171 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_4336: 622269-624268 Chenopodium quinoa
AUR62038171 2.0kb downstream 2.0kb downstream 12530 true C_Quinoa_Scaffold_4336: 609739-622268 Chenopodium quinoa
AUR62038171 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_4336: 609739-611738 Chenopodium quinoa
AUR62038171 5.0kb upstream 5.0kb upstream 15530 true C_Quinoa_Scaffold_4336: 611739-627268 Chenopodium quinoa
AUR62038171 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_4336: 622269-627268 Chenopodium quinoa
AUR62038171 5.0kb downstream 5.0kb downstream 15530 true C_Quinoa_Scaffold_4336: 606739-622268 Chenopodium quinoa
AUR62038171 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_4336: 606739-611738 Chenopodium quinoa
AUR62038171 10.0kb upstream 10.0kb upstream 20530 true C_Quinoa_Scaffold_4336: 611739-632268 Chenopodium quinoa
AUR62038171 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_4336: 622269-632268 Chenopodium quinoa
AUR62038171 10.0kb downstream 10.0kb downstream 20530 true C_Quinoa_Scaffold_4336: 601739-622268 Chenopodium quinoa
AUR62038171 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_4336: 601739-611738 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026169 5273 Angiosperm View MSA
123738156 5271 Pentapetalae View MSA
122787757 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121350344 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain