Gene : AUR62032308 C. quinoa v1.0

Defline:  (1 of 1) K09272 - structure-specific recognition protein 1 (SSRP1) Genomic Order:  89
Name:  ? AUR62032308 Secondary Identifier:  ? PAC:36282535

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62032308 0.5kb upstream 0.5kb upstream 9118 true C_Quinoa_Scaffold_1762: 1167011-1176128 Chenopodium quinoa
AUR62032308 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1762: 1167011-1167510 Chenopodium quinoa
AUR62032308 0.5kb downstream 0.5kb downstream 9118 true C_Quinoa_Scaffold_1762: 1167511-1176628 Chenopodium quinoa
AUR62032308 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1762: 1176129-1176628 Chenopodium quinoa
AUR62032308 1.0kb upstream 1.0kb upstream 9618 true C_Quinoa_Scaffold_1762: 1166511-1176128 Chenopodium quinoa
AUR62032308 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1762: 1166511-1167510 Chenopodium quinoa
AUR62032308 1.0kb downstream 1.0kb downstream 9618 true C_Quinoa_Scaffold_1762: 1167511-1177128 Chenopodium quinoa
AUR62032308 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1762: 1176129-1177128 Chenopodium quinoa
AUR62032308 2.0kb upstream 2.0kb upstream 10618 true C_Quinoa_Scaffold_1762: 1165511-1176128 Chenopodium quinoa
AUR62032308 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1762: 1165511-1167510 Chenopodium quinoa
AUR62032308 2.0kb downstream 2.0kb downstream 10618 true C_Quinoa_Scaffold_1762: 1167511-1178128 Chenopodium quinoa
AUR62032308 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1762: 1176129-1178128 Chenopodium quinoa
AUR62032308 5.0kb upstream 5.0kb upstream 13618 true C_Quinoa_Scaffold_1762: 1162511-1176128 Chenopodium quinoa
AUR62032308 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1762: 1162511-1167510 Chenopodium quinoa
AUR62032308 5.0kb downstream 5.0kb downstream 13618 true C_Quinoa_Scaffold_1762: 1167511-1181128 Chenopodium quinoa
AUR62032308 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1762: 1176129-1181128 Chenopodium quinoa
AUR62032308 10.0kb upstream 10.0kb upstream 18618 true C_Quinoa_Scaffold_1762: 1157511-1176128 Chenopodium quinoa
AUR62032308 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1762: 1157511-1167510 Chenopodium quinoa
AUR62032308 10.0kb downstream 10.0kb downstream 18618 true C_Quinoa_Scaffold_1762: 1167511-1186128 Chenopodium quinoa
AUR62032308 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1762: 1176129-1186128 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123744635 5271 Pentapetalae View MSA
122790158 5272 Eudicot View MSA
122041570 5273 Angiosperm View MSA
121347609 5274 Embryophyte View MSA
123424150 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain