Gene : AUR62042433 C. quinoa v1.0
Defline:  (1 of 2) PTHR31423//PTHR31423:SF3 - FAMILY NOT NAMED // PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  12
Name:  ? AUR62042433 Secondary Identifier:  ? PAC:36308896
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa TRNA-CHARGING-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62042433 0.5kb upstream 0.5kb upstream 8824 true C_Quinoa_Scaffold_4472: 598904-607727 Chenopodium quinoa
AUR62042433 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_4472: 607228-607727 Chenopodium quinoa
AUR62042433 0.5kb downstream 0.5kb downstream 8824 true C_Quinoa_Scaffold_4472: 598404-607227 Chenopodium quinoa
AUR62042433 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_4472: 598404-598903 Chenopodium quinoa
AUR62042433 1.0kb upstream 1.0kb upstream 9324 true C_Quinoa_Scaffold_4472: 598904-608227 Chenopodium quinoa
AUR62042433 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_4472: 607228-608227 Chenopodium quinoa
AUR62042433 1.0kb downstream 1.0kb downstream 9324 true C_Quinoa_Scaffold_4472: 597904-607227 Chenopodium quinoa
AUR62042433 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_4472: 597904-598903 Chenopodium quinoa
AUR62042433 2.0kb upstream 2.0kb upstream 10324 true C_Quinoa_Scaffold_4472: 598904-609227 Chenopodium quinoa
AUR62042433 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_4472: 607228-609227 Chenopodium quinoa
AUR62042433 2.0kb downstream 2.0kb downstream 10324 true C_Quinoa_Scaffold_4472: 596904-607227 Chenopodium quinoa
AUR62042433 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_4472: 596904-598903 Chenopodium quinoa
AUR62042433 5.0kb upstream 5.0kb upstream 13324 true C_Quinoa_Scaffold_4472: 598904-612227 Chenopodium quinoa
AUR62042433 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_4472: 607228-612227 Chenopodium quinoa
AUR62042433 5.0kb downstream 5.0kb downstream 13324 true C_Quinoa_Scaffold_4472: 593904-607227 Chenopodium quinoa
AUR62042433 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_4472: 593904-598903 Chenopodium quinoa
AUR62042433 10.0kb upstream 10.0kb upstream 18324 true C_Quinoa_Scaffold_4472: 598904-617227 Chenopodium quinoa
AUR62042433 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_4472: 607228-617227 Chenopodium quinoa
AUR62042433 10.0kb downstream 10.0kb downstream 18324 true C_Quinoa_Scaffold_4472: 588904-607227 Chenopodium quinoa
AUR62042433 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_4472: 588904-598903 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123736377 5271 Pentapetalae View MSA
122789736 5272 Eudicot View MSA
122045268 5273 Angiosperm View MSA
121348045 5274 Embryophyte View MSA
123425543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain