Gene : AUR62038585 C. quinoa v1.0
Defline:  (1 of 7) K13525 - transitional endoplasmic reticulum ATPase (VCP, CDC48) Genomic Order:  26
Name:  ? AUR62038585 Secondary Identifier:  ? PAC:36304418
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62038585 0.5kb upstream 0.5kb upstream 7128 true C_Quinoa_Scaffold_1993: 2209609-2216736 Chenopodium quinoa
AUR62038585 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1993: 2209609-2210108 Chenopodium quinoa
AUR62038585 0.5kb downstream 0.5kb downstream 7128 true C_Quinoa_Scaffold_1993: 2210109-2217236 Chenopodium quinoa
AUR62038585 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1993: 2216737-2217236 Chenopodium quinoa
AUR62038585 1.0kb upstream 1.0kb upstream 7628 true C_Quinoa_Scaffold_1993: 2209109-2216736 Chenopodium quinoa
AUR62038585 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1993: 2209109-2210108 Chenopodium quinoa
AUR62038585 1.0kb downstream 1.0kb downstream 7628 true C_Quinoa_Scaffold_1993: 2210109-2217736 Chenopodium quinoa
AUR62038585 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1993: 2216737-2217736 Chenopodium quinoa
AUR62038585 2.0kb upstream 2.0kb upstream 8628 true C_Quinoa_Scaffold_1993: 2208109-2216736 Chenopodium quinoa
AUR62038585 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1993: 2208109-2210108 Chenopodium quinoa
AUR62038585 2.0kb downstream 2.0kb downstream 8628 true C_Quinoa_Scaffold_1993: 2210109-2218736 Chenopodium quinoa
AUR62038585 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1993: 2216737-2218736 Chenopodium quinoa
AUR62038585 5.0kb upstream 5.0kb upstream 11628 true C_Quinoa_Scaffold_1993: 2205109-2216736 Chenopodium quinoa
AUR62038585 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1993: 2205109-2210108 Chenopodium quinoa
AUR62038585 5.0kb downstream 5.0kb downstream 11628 true C_Quinoa_Scaffold_1993: 2210109-2221736 Chenopodium quinoa
AUR62038585 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1993: 2216737-2221736 Chenopodium quinoa
AUR62038585 10.0kb upstream 10.0kb upstream 16628 true C_Quinoa_Scaffold_1993: 2200109-2216736 Chenopodium quinoa
AUR62038585 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1993: 2200109-2210108 Chenopodium quinoa
AUR62038585 10.0kb downstream 10.0kb downstream 16628 true C_Quinoa_Scaffold_1993: 2210109-2226736 Chenopodium quinoa
AUR62038585 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1993: 2216737-2226736 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123746983 5271 Pentapetalae View MSA
122795799 5272 Eudicot View MSA
122048605 5273 Angiosperm View MSA
121347913 5274 Embryophyte View MSA
123424841 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain