Gene : AUR62030002 C. quinoa v1.0
Defline:  (1 of 69) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  42
Name:  ? AUR62030002 Secondary Identifier:  ? PAC:36291782
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-1081 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62030002 0.5kb upstream 0.5kb upstream 4978 true C_Quinoa_Scaffold_1447: 2748216-2753193 Chenopodium quinoa
AUR62030002 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1447: 2748216-2748715 Chenopodium quinoa
AUR62030002 0.5kb downstream 0.5kb downstream 4978 true C_Quinoa_Scaffold_1447: 2748716-2753693 Chenopodium quinoa
AUR62030002 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1447: 2753194-2753693 Chenopodium quinoa
AUR62030002 1.0kb upstream 1.0kb upstream 5478 true C_Quinoa_Scaffold_1447: 2747716-2753193 Chenopodium quinoa
AUR62030002 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1447: 2747716-2748715 Chenopodium quinoa
AUR62030002 1.0kb downstream 1.0kb downstream 5478 true C_Quinoa_Scaffold_1447: 2748716-2754193 Chenopodium quinoa
AUR62030002 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1447: 2753194-2754193 Chenopodium quinoa
AUR62030002 2.0kb upstream 2.0kb upstream 6478 true C_Quinoa_Scaffold_1447: 2746716-2753193 Chenopodium quinoa
AUR62030002 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1447: 2746716-2748715 Chenopodium quinoa
AUR62030002 2.0kb downstream 2.0kb downstream 6478 true C_Quinoa_Scaffold_1447: 2748716-2755193 Chenopodium quinoa
AUR62030002 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1447: 2753194-2755193 Chenopodium quinoa
AUR62030002 5.0kb upstream 5.0kb upstream 9478 true C_Quinoa_Scaffold_1447: 2743716-2753193 Chenopodium quinoa
AUR62030002 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1447: 2743716-2748715 Chenopodium quinoa
AUR62030002 5.0kb downstream 5.0kb downstream 9478 true C_Quinoa_Scaffold_1447: 2748716-2758193 Chenopodium quinoa
AUR62030002 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1447: 2753194-2758193 Chenopodium quinoa
AUR62030002 10.0kb upstream 10.0kb upstream 14478 true C_Quinoa_Scaffold_1447: 2738716-2753193 Chenopodium quinoa
AUR62030002 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1447: 2738716-2748715 Chenopodium quinoa
AUR62030002 10.0kb downstream 10.0kb downstream 14478 true C_Quinoa_Scaffold_1447: 2748716-2763193 Chenopodium quinoa
AUR62030002 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1447: 2753194-2763193 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123736627 5271 Pentapetalae View MSA
122795582 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain