Gene : AUR62021992 C. quinoa v1.0
Defline:  (1 of 2) PTHR10314//PTHR10314:SF123 - SER/THR DEHYDRATASE, TRP SYNTHASE // TRYPTOPHAN SYNTHASE BETA CHAIN-LIKE PROTEIN Genomic Order:  198
Name:  ? AUR62021992 Secondary Identifier:  ? PAC:36304245
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa TRPSYN-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62021992 0.5kb upstream 0.5kb upstream 4729 true C_Quinoa_Scaffold_1862: 2301481-2306209 Chenopodium quinoa
AUR62021992 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1862: 2305710-2306209 Chenopodium quinoa
AUR62021992 0.5kb downstream 0.5kb downstream 4729 true C_Quinoa_Scaffold_1862: 2300981-2305709 Chenopodium quinoa
AUR62021992 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1862: 2300981-2301480 Chenopodium quinoa
AUR62021992 1.0kb upstream 1.0kb upstream 5229 true C_Quinoa_Scaffold_1862: 2301481-2306709 Chenopodium quinoa
AUR62021992 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1862: 2305710-2306709 Chenopodium quinoa
AUR62021992 1.0kb downstream 1.0kb downstream 5229 true C_Quinoa_Scaffold_1862: 2300481-2305709 Chenopodium quinoa
AUR62021992 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1862: 2300481-2301480 Chenopodium quinoa
AUR62021992 2.0kb upstream 2.0kb upstream 6229 true C_Quinoa_Scaffold_1862: 2301481-2307709 Chenopodium quinoa
AUR62021992 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1862: 2305710-2307709 Chenopodium quinoa
AUR62021992 2.0kb downstream 2.0kb downstream 6229 true C_Quinoa_Scaffold_1862: 2299481-2305709 Chenopodium quinoa
AUR62021992 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1862: 2299481-2301480 Chenopodium quinoa
AUR62021992 5.0kb upstream 5.0kb upstream 9229 true C_Quinoa_Scaffold_1862: 2301481-2310709 Chenopodium quinoa
AUR62021992 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1862: 2305710-2310709 Chenopodium quinoa
AUR62021992 5.0kb downstream 5.0kb downstream 9229 true C_Quinoa_Scaffold_1862: 2296481-2305709 Chenopodium quinoa
AUR62021992 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1862: 2296481-2301480 Chenopodium quinoa
AUR62021992 10.0kb upstream 10.0kb upstream 14229 true C_Quinoa_Scaffold_1862: 2301481-2315709 Chenopodium quinoa
AUR62021992 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1862: 2305710-2315709 Chenopodium quinoa
AUR62021992 10.0kb downstream 10.0kb downstream 14229 true C_Quinoa_Scaffold_1862: 2291481-2305709 Chenopodium quinoa
AUR62021992 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1862: 2291481-2301480 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123745831 5271 Pentapetalae View MSA
122787401 5272 Eudicot View MSA
122044231 5273 Angiosperm View MSA
121344651 5274 Embryophyte View MSA
123423776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain