Gene : AUR62021938 C. quinoa v1.0
Defline:  (1 of 3) PTHR21022//PTHR21022:SF4 - PREPHENATE DEHYDRATASE P PROTEIN // AROGENATE DEHYDRATASE/PREPHENATE DEHYDRATASE 1, CHLOROPLASTIC Genomic Order:  144
Name:  ? AUR62021938 Secondary Identifier:  ? PAC:36304185
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-3462 Chenopodium quinoa pathologic  
Cquinoa PWY-3481 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62021938 0.5kb upstream 0.5kb upstream 9615 true C_Quinoa_Scaffold_1862: 1672067-1681681 Chenopodium quinoa
AUR62021938 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1862: 1681182-1681681 Chenopodium quinoa
AUR62021938 0.5kb downstream 0.5kb downstream 9615 true C_Quinoa_Scaffold_1862: 1671567-1681181 Chenopodium quinoa
AUR62021938 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1862: 1671567-1672066 Chenopodium quinoa
AUR62021938 1.0kb upstream 1.0kb upstream 10115 true C_Quinoa_Scaffold_1862: 1672067-1682181 Chenopodium quinoa
AUR62021938 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1862: 1681182-1682181 Chenopodium quinoa
AUR62021938 1.0kb downstream 1.0kb downstream 10115 true C_Quinoa_Scaffold_1862: 1671067-1681181 Chenopodium quinoa
AUR62021938 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1862: 1671067-1672066 Chenopodium quinoa
AUR62021938 2.0kb upstream 2.0kb upstream 11115 true C_Quinoa_Scaffold_1862: 1672067-1683181 Chenopodium quinoa
AUR62021938 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1862: 1681182-1683181 Chenopodium quinoa
AUR62021938 2.0kb downstream 2.0kb downstream 11115 true C_Quinoa_Scaffold_1862: 1670067-1681181 Chenopodium quinoa
AUR62021938 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1862: 1670067-1672066 Chenopodium quinoa
AUR62021938 5.0kb upstream 5.0kb upstream 14115 true C_Quinoa_Scaffold_1862: 1672067-1686181 Chenopodium quinoa
AUR62021938 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1862: 1681182-1686181 Chenopodium quinoa
AUR62021938 5.0kb downstream 5.0kb downstream 14115 true C_Quinoa_Scaffold_1862: 1667067-1681181 Chenopodium quinoa
AUR62021938 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1862: 1667067-1672066 Chenopodium quinoa
AUR62021938 10.0kb upstream 10.0kb upstream 19115 true C_Quinoa_Scaffold_1862: 1672067-1691181 Chenopodium quinoa
AUR62021938 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1862: 1681182-1691181 Chenopodium quinoa
AUR62021938 10.0kb downstream 10.0kb downstream 19115 true C_Quinoa_Scaffold_1862: 1662067-1681181 Chenopodium quinoa
AUR62021938 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1862: 1662067-1672066 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123746635 5271 Pentapetalae View MSA
122795634 5272 Eudicot View MSA
122042719 5273 Angiosperm View MSA
121351398 5274 Embryophyte View MSA
123427097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain