Gene : AUR62014015 C. quinoa v1.0
Defline:  (1 of 4) K00797 - spermidine synthase (speE, SRM) Genomic Order:  84
Name:  ? AUR62014015 Secondary Identifier:  ? PAC:36309106
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa BSUBPOLYAMSYN-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-7528 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62014015 0.5kb upstream 0.5kb upstream 5664 true C_Quinoa_Scaffold_3035: 2507508-2513171 Chenopodium quinoa
AUR62014015 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3035: 2512672-2513171 Chenopodium quinoa
AUR62014015 0.5kb downstream 0.5kb downstream 5664 true C_Quinoa_Scaffold_3035: 2507008-2512671 Chenopodium quinoa
AUR62014015 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3035: 2507008-2507507 Chenopodium quinoa
AUR62014015 1.0kb upstream 1.0kb upstream 6164 true C_Quinoa_Scaffold_3035: 2507508-2513671 Chenopodium quinoa
AUR62014015 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3035: 2512672-2513671 Chenopodium quinoa
AUR62014015 1.0kb downstream 1.0kb downstream 6164 true C_Quinoa_Scaffold_3035: 2506508-2512671 Chenopodium quinoa
AUR62014015 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3035: 2506508-2507507 Chenopodium quinoa
AUR62014015 2.0kb upstream 2.0kb upstream 7164 true C_Quinoa_Scaffold_3035: 2507508-2514671 Chenopodium quinoa
AUR62014015 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3035: 2512672-2514671 Chenopodium quinoa
AUR62014015 2.0kb downstream 2.0kb downstream 7164 true C_Quinoa_Scaffold_3035: 2505508-2512671 Chenopodium quinoa
AUR62014015 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3035: 2505508-2507507 Chenopodium quinoa
AUR62014015 5.0kb upstream 5.0kb upstream 10164 true C_Quinoa_Scaffold_3035: 2507508-2517671 Chenopodium quinoa
AUR62014015 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3035: 2512672-2517671 Chenopodium quinoa
AUR62014015 5.0kb downstream 5.0kb downstream 10164 true C_Quinoa_Scaffold_3035: 2502508-2512671 Chenopodium quinoa
AUR62014015 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3035: 2502508-2507507 Chenopodium quinoa
AUR62014015 10.0kb upstream 10.0kb upstream 15164 true C_Quinoa_Scaffold_3035: 2507508-2522671 Chenopodium quinoa
AUR62014015 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3035: 2512672-2522671 Chenopodium quinoa
AUR62014015 10.0kb downstream 10.0kb downstream 15164 true C_Quinoa_Scaffold_3035: 2497508-2512671 Chenopodium quinoa
AUR62014015 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3035: 2497508-2507507 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123741827 5271 Pentapetalae View MSA
122790008 5272 Eudicot View MSA
122043696 5273 Angiosperm View MSA
121346443 5274 Embryophyte View MSA
123424303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain