Gene : AUR62028271 C. quinoa v1.0
Defline:  (1 of 3) K08963 - methylthioribose-1-phosphate isomerase (mtnA) Genomic Order:  23
Name:  ? AUR62028271 Secondary Identifier:  ? PAC:36305400
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-4361 Chenopodium quinoa pathologic  
Cquinoa PWY-7270 Chenopodium quinoa pathologic  
Cquinoa PWY-7528 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62028271 0.5kb upstream 0.5kb upstream 5496 true C_Quinoa_Scaffold_1426: 1411455-1416950 Chenopodium quinoa
AUR62028271 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1426: 1416451-1416950 Chenopodium quinoa
AUR62028271 0.5kb downstream 0.5kb downstream 5496 true C_Quinoa_Scaffold_1426: 1410955-1416450 Chenopodium quinoa
AUR62028271 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1426: 1410955-1411454 Chenopodium quinoa
AUR62028271 1.0kb upstream 1.0kb upstream 5996 true C_Quinoa_Scaffold_1426: 1411455-1417450 Chenopodium quinoa
AUR62028271 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1426: 1416451-1417450 Chenopodium quinoa
AUR62028271 1.0kb downstream 1.0kb downstream 5996 true C_Quinoa_Scaffold_1426: 1410455-1416450 Chenopodium quinoa
AUR62028271 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1426: 1410455-1411454 Chenopodium quinoa
AUR62028271 2.0kb upstream 2.0kb upstream 6996 true C_Quinoa_Scaffold_1426: 1411455-1418450 Chenopodium quinoa
AUR62028271 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1426: 1416451-1418450 Chenopodium quinoa
AUR62028271 2.0kb downstream 2.0kb downstream 6996 true C_Quinoa_Scaffold_1426: 1409455-1416450 Chenopodium quinoa
AUR62028271 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1426: 1409455-1411454 Chenopodium quinoa
AUR62028271 5.0kb upstream 5.0kb upstream 9996 true C_Quinoa_Scaffold_1426: 1411455-1421450 Chenopodium quinoa
AUR62028271 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1426: 1416451-1421450 Chenopodium quinoa
AUR62028271 5.0kb downstream 5.0kb downstream 9996 true C_Quinoa_Scaffold_1426: 1406455-1416450 Chenopodium quinoa
AUR62028271 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1426: 1406455-1411454 Chenopodium quinoa
AUR62028271 10.0kb upstream 10.0kb upstream 14996 true C_Quinoa_Scaffold_1426: 1411455-1426450 Chenopodium quinoa
AUR62028271 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1426: 1416451-1426450 Chenopodium quinoa
AUR62028271 10.0kb downstream 10.0kb downstream 14996 true C_Quinoa_Scaffold_1426: 1401455-1416450 Chenopodium quinoa
AUR62028271 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1426: 1401455-1411454 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123740094 5271 Pentapetalae View MSA
122788864 5272 Eudicot View MSA
122043863 5273 Angiosperm View MSA
121310201 5274 Embryophyte View MSA
123428305 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain