Gene : AUR62034460 C. quinoa v1.0
Defline:  (1 of 2) PTHR21145:SF0 - CHORISMATE MUTASE Genomic Order:  75
Name:  ? AUR62034460 Secondary Identifier:  ? PAC:36287818
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-3461 Chenopodium quinoa pathologic  
Cquinoa PWY-3462 Chenopodium quinoa pathologic  
Cquinoa PWY-3481 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62034460 0.5kb upstream 0.5kb upstream 7798 true C_Quinoa_Scaffold_2742: 3556625-3564422 Chenopodium quinoa
AUR62034460 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2742: 3563923-3564422 Chenopodium quinoa
AUR62034460 0.5kb downstream 0.5kb downstream 7798 true C_Quinoa_Scaffold_2742: 3556125-3563922 Chenopodium quinoa
AUR62034460 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2742: 3556125-3556624 Chenopodium quinoa
AUR62034460 1.0kb upstream 1.0kb upstream 8298 true C_Quinoa_Scaffold_2742: 3556625-3564922 Chenopodium quinoa
AUR62034460 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2742: 3563923-3564922 Chenopodium quinoa
AUR62034460 1.0kb downstream 1.0kb downstream 8298 true C_Quinoa_Scaffold_2742: 3555625-3563922 Chenopodium quinoa
AUR62034460 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2742: 3555625-3556624 Chenopodium quinoa
AUR62034460 2.0kb upstream 2.0kb upstream 9298 true C_Quinoa_Scaffold_2742: 3556625-3565922 Chenopodium quinoa
AUR62034460 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2742: 3563923-3565922 Chenopodium quinoa
AUR62034460 2.0kb downstream 2.0kb downstream 9298 true C_Quinoa_Scaffold_2742: 3554625-3563922 Chenopodium quinoa
AUR62034460 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2742: 3554625-3556624 Chenopodium quinoa
AUR62034460 5.0kb upstream 5.0kb upstream 12298 true C_Quinoa_Scaffold_2742: 3556625-3568922 Chenopodium quinoa
AUR62034460 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2742: 3563923-3568922 Chenopodium quinoa
AUR62034460 5.0kb downstream 5.0kb downstream 12298 true C_Quinoa_Scaffold_2742: 3551625-3563922 Chenopodium quinoa
AUR62034460 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2742: 3551625-3556624 Chenopodium quinoa
AUR62034460 10.0kb upstream 10.0kb upstream 17298 true C_Quinoa_Scaffold_2742: 3556625-3573922 Chenopodium quinoa
AUR62034460 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2742: 3563923-3573922 Chenopodium quinoa
AUR62034460 10.0kb downstream 10.0kb downstream 17298 true C_Quinoa_Scaffold_2742: 3546625-3563922 Chenopodium quinoa
AUR62034460 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2742: 3546625-3556624 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781316 5273 Angiosperm View MSA
123749313 5271 Pentapetalae View MSA
122773087 5272 Eudicot View MSA
121052894 5274 Embryophyte View MSA
123092925 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain