Gene : AUR62008941 C. quinoa v1.0
Defline:  (1 of 1) K06001 - tryptophan synthase beta chain (trpB) Genomic Order:  386
Name:  ? AUR62008941 Secondary Identifier:  ? PAC:36315342
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa TRPSYN-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62008941 0.5kb upstream 0.5kb upstream 6155 true C_Quinoa_Scaffold_1710: 8076244-8082398 Chenopodium quinoa
AUR62008941 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1710: 8076244-8076743 Chenopodium quinoa
AUR62008941 0.5kb downstream 0.5kb downstream 6155 true C_Quinoa_Scaffold_1710: 8076744-8082898 Chenopodium quinoa
AUR62008941 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1710: 8082399-8082898 Chenopodium quinoa
AUR62008941 1.0kb upstream 1.0kb upstream 6655 true C_Quinoa_Scaffold_1710: 8075744-8082398 Chenopodium quinoa
AUR62008941 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1710: 8075744-8076743 Chenopodium quinoa
AUR62008941 1.0kb downstream 1.0kb downstream 6655 true C_Quinoa_Scaffold_1710: 8076744-8083398 Chenopodium quinoa
AUR62008941 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1710: 8082399-8083398 Chenopodium quinoa
AUR62008941 2.0kb upstream 2.0kb upstream 7655 true C_Quinoa_Scaffold_1710: 8074744-8082398 Chenopodium quinoa
AUR62008941 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1710: 8074744-8076743 Chenopodium quinoa
AUR62008941 2.0kb downstream 2.0kb downstream 7655 true C_Quinoa_Scaffold_1710: 8076744-8084398 Chenopodium quinoa
AUR62008941 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1710: 8082399-8084398 Chenopodium quinoa
AUR62008941 5.0kb upstream 5.0kb upstream 10655 true C_Quinoa_Scaffold_1710: 8071744-8082398 Chenopodium quinoa
AUR62008941 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1710: 8071744-8076743 Chenopodium quinoa
AUR62008941 5.0kb downstream 5.0kb downstream 10655 true C_Quinoa_Scaffold_1710: 8076744-8087398 Chenopodium quinoa
AUR62008941 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1710: 8082399-8087398 Chenopodium quinoa
AUR62008941 10.0kb upstream 10.0kb upstream 15655 true C_Quinoa_Scaffold_1710: 8066744-8082398 Chenopodium quinoa
AUR62008941 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1710: 8066744-8076743 Chenopodium quinoa
AUR62008941 10.0kb downstream 10.0kb downstream 15655 true C_Quinoa_Scaffold_1710: 8076744-8092398 Chenopodium quinoa
AUR62008941 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1710: 8082399-8092398 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123740538 5271 Pentapetalae View MSA
122790993 5272 Eudicot View MSA
122043348 5273 Angiosperm View MSA
121348084 5274 Embryophyte View MSA
123380724 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain