Gene : AUR62039459 C. quinoa v1.0

Defline:  (1 of 2) PTHR34449:SF1 - RHO TERMINATION FACTOR Genomic Order:  6
Name:  ? AUR62039459 Secondary Identifier:  ? PAC:36300847

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62039459 0.5kb upstream 0.5kb upstream 2729 true C_Quinoa_Scaffold_1037: 71205-73933 Chenopodium quinoa
AUR62039459 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1037: 73434-73933 Chenopodium quinoa
AUR62039459 0.5kb downstream 0.5kb downstream 2729 true C_Quinoa_Scaffold_1037: 70705-73433 Chenopodium quinoa
AUR62039459 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1037: 70705-71204 Chenopodium quinoa
AUR62039459 1.0kb upstream 1.0kb upstream 3229 true C_Quinoa_Scaffold_1037: 71205-74433 Chenopodium quinoa
AUR62039459 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1037: 73434-74433 Chenopodium quinoa
AUR62039459 1.0kb downstream 1.0kb downstream 3229 true C_Quinoa_Scaffold_1037: 70205-73433 Chenopodium quinoa
AUR62039459 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1037: 70205-71204 Chenopodium quinoa
AUR62039459 2.0kb upstream 2.0kb upstream 4229 true C_Quinoa_Scaffold_1037: 71205-75433 Chenopodium quinoa
AUR62039459 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1037: 73434-75433 Chenopodium quinoa
AUR62039459 2.0kb downstream 2.0kb downstream 4229 true C_Quinoa_Scaffold_1037: 69205-73433 Chenopodium quinoa
AUR62039459 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1037: 69205-71204 Chenopodium quinoa
AUR62039459 5.0kb upstream 5.0kb upstream 7229 true C_Quinoa_Scaffold_1037: 71205-78433 Chenopodium quinoa
AUR62039459 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1037: 73434-78433 Chenopodium quinoa
AUR62039459 5.0kb downstream 5.0kb downstream 7229 true C_Quinoa_Scaffold_1037: 66205-73433 Chenopodium quinoa
AUR62039459 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1037: 66205-71204 Chenopodium quinoa
AUR62039459 10.0kb upstream 10.0kb upstream 12229 true C_Quinoa_Scaffold_1037: 71205-83433 Chenopodium quinoa
AUR62039459 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1037: 73434-83433 Chenopodium quinoa
AUR62039459 10.0kb downstream 10.0kb downstream 12229 true C_Quinoa_Scaffold_1037: 61205-73433 Chenopodium quinoa
AUR62039459 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1037: 61205-71204 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123740381 5271 Pentapetalae View MSA
122794341 5272 Eudicot View MSA
122047343 5273 Angiosperm View MSA
121310732 5274 Embryophyte View MSA
123348145 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain