Gene : AUR62000175 C. quinoa v1.0

Defline:  (1 of 2) K10777 - DNA ligase 4 (LIG4, DNL4) Genomic Order:  175
Name:  ? AUR62000175 Secondary Identifier:  ? PAC:36298799

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62000175 0.5kb upstream 0.5kb upstream 4097 true C_Quinoa_Scaffold_2088: 1896910-1901006 Chenopodium quinoa
AUR62000175 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2088: 1900507-1901006 Chenopodium quinoa
AUR62000175 0.5kb downstream 0.5kb downstream 4097 true C_Quinoa_Scaffold_2088: 1896410-1900506 Chenopodium quinoa
AUR62000175 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2088: 1896410-1896909 Chenopodium quinoa
AUR62000175 1.0kb upstream 1.0kb upstream 4597 true C_Quinoa_Scaffold_2088: 1896910-1901506 Chenopodium quinoa
AUR62000175 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2088: 1900507-1901506 Chenopodium quinoa
AUR62000175 1.0kb downstream 1.0kb downstream 4597 true C_Quinoa_Scaffold_2088: 1895910-1900506 Chenopodium quinoa
AUR62000175 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2088: 1895910-1896909 Chenopodium quinoa
AUR62000175 2.0kb upstream 2.0kb upstream 5597 true C_Quinoa_Scaffold_2088: 1896910-1902506 Chenopodium quinoa
AUR62000175 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2088: 1900507-1902506 Chenopodium quinoa
AUR62000175 2.0kb downstream 2.0kb downstream 5597 true C_Quinoa_Scaffold_2088: 1894910-1900506 Chenopodium quinoa
AUR62000175 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2088: 1894910-1896909 Chenopodium quinoa
AUR62000175 5.0kb upstream 5.0kb upstream 8597 true C_Quinoa_Scaffold_2088: 1896910-1905506 Chenopodium quinoa
AUR62000175 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2088: 1900507-1905506 Chenopodium quinoa
AUR62000175 5.0kb downstream 5.0kb downstream 8597 true C_Quinoa_Scaffold_2088: 1891910-1900506 Chenopodium quinoa
AUR62000175 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2088: 1891910-1896909 Chenopodium quinoa
AUR62000175 10.0kb upstream 10.0kb upstream 13597 true C_Quinoa_Scaffold_2088: 1896910-1910506 Chenopodium quinoa
AUR62000175 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2088: 1900507-1910506 Chenopodium quinoa
AUR62000175 10.0kb downstream 10.0kb downstream 13597 true C_Quinoa_Scaffold_2088: 1886910-1900506 Chenopodium quinoa
AUR62000175 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2088: 1886910-1896909 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123748643 5271 Pentapetalae View MSA
122787045 5272 Eudicot View MSA
122045949 5273 Angiosperm View MSA
121346093 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain