Gene : AUR62016117 C. quinoa v1.0
Defline:  (1 of 3) K00615 - transketolase (E2.2.1.1, tktA, tktB) Genomic Order:  175
Name:  ? AUR62016117 Secondary Identifier:  ? PAC:36288761
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa CALVIN-PWY Chenopodium quinoa pathologic  
Cquinoa NONOXIPENT-PWY Chenopodium quinoa pathologic  
Cquinoa PENTOSE-P-PWY Chenopodium quinoa pathologic  
Cquinoa PHOTOALL-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-5723 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62016117 0.5kb upstream 0.5kb upstream 5247 true C_Quinoa_Scaffold_3256: 1933809-1939055 Chenopodium quinoa
AUR62016117 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3256: 1933809-1934308 Chenopodium quinoa
AUR62016117 0.5kb downstream 0.5kb downstream 5247 true C_Quinoa_Scaffold_3256: 1934309-1939555 Chenopodium quinoa
AUR62016117 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3256: 1939056-1939555 Chenopodium quinoa
AUR62016117 1.0kb upstream 1.0kb upstream 5747 true C_Quinoa_Scaffold_3256: 1933309-1939055 Chenopodium quinoa
AUR62016117 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3256: 1933309-1934308 Chenopodium quinoa
AUR62016117 1.0kb downstream 1.0kb downstream 5747 true C_Quinoa_Scaffold_3256: 1934309-1940055 Chenopodium quinoa
AUR62016117 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3256: 1939056-1940055 Chenopodium quinoa
AUR62016117 2.0kb upstream 2.0kb upstream 6747 true C_Quinoa_Scaffold_3256: 1932309-1939055 Chenopodium quinoa
AUR62016117 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3256: 1932309-1934308 Chenopodium quinoa
AUR62016117 2.0kb downstream 2.0kb downstream 6747 true C_Quinoa_Scaffold_3256: 1934309-1941055 Chenopodium quinoa
AUR62016117 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3256: 1939056-1941055 Chenopodium quinoa
AUR62016117 5.0kb upstream 5.0kb upstream 9747 true C_Quinoa_Scaffold_3256: 1929309-1939055 Chenopodium quinoa
AUR62016117 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3256: 1929309-1934308 Chenopodium quinoa
AUR62016117 5.0kb downstream 5.0kb downstream 9747 true C_Quinoa_Scaffold_3256: 1934309-1944055 Chenopodium quinoa
AUR62016117 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3256: 1939056-1944055 Chenopodium quinoa
AUR62016117 10.0kb upstream 10.0kb upstream 14747 true C_Quinoa_Scaffold_3256: 1924309-1939055 Chenopodium quinoa
AUR62016117 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3256: 1924309-1934308 Chenopodium quinoa
AUR62016117 10.0kb downstream 10.0kb downstream 14747 true C_Quinoa_Scaffold_3256: 1934309-1949055 Chenopodium quinoa
AUR62016117 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3256: 1939056-1949055 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123741287 5271 Pentapetalae View MSA
122787703 5272 Eudicot View MSA
122048752 5273 Angiosperm View MSA
121350420 5274 Embryophyte View MSA
123423818 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain