Gene : AUR62026870 C. quinoa v1.0
Defline:  (1 of 5) K12830 - splicing factor 3B subunit 3 (SF3B3, SAP130, RSE1) Genomic Order:  65
Name:  ? AUR62026870 Secondary Identifier:  ? PAC:36310940
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-7511 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62026870 0.5kb upstream 0.5kb upstream 18567 true C_Quinoa_Scaffold_2185: 1180277-1198843 Chenopodium quinoa
AUR62026870 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2185: 1180277-1180776 Chenopodium quinoa
AUR62026870 0.5kb downstream 0.5kb downstream 18567 true C_Quinoa_Scaffold_2185: 1180777-1199343 Chenopodium quinoa
AUR62026870 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2185: 1198844-1199343 Chenopodium quinoa
AUR62026870 1.0kb upstream 1.0kb upstream 19067 true C_Quinoa_Scaffold_2185: 1179777-1198843 Chenopodium quinoa
AUR62026870 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2185: 1179777-1180776 Chenopodium quinoa
AUR62026870 1.0kb downstream 1.0kb downstream 19067 true C_Quinoa_Scaffold_2185: 1180777-1199843 Chenopodium quinoa
AUR62026870 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2185: 1198844-1199843 Chenopodium quinoa
AUR62026870 2.0kb upstream 2.0kb upstream 20067 true C_Quinoa_Scaffold_2185: 1178777-1198843 Chenopodium quinoa
AUR62026870 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2185: 1178777-1180776 Chenopodium quinoa
AUR62026870 2.0kb downstream 2.0kb downstream 20067 true C_Quinoa_Scaffold_2185: 1180777-1200843 Chenopodium quinoa
AUR62026870 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2185: 1198844-1200843 Chenopodium quinoa
AUR62026870 5.0kb upstream 5.0kb upstream 23067 true C_Quinoa_Scaffold_2185: 1175777-1198843 Chenopodium quinoa
AUR62026870 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2185: 1175777-1180776 Chenopodium quinoa
AUR62026870 5.0kb downstream 5.0kb downstream 23067 true C_Quinoa_Scaffold_2185: 1180777-1203843 Chenopodium quinoa
AUR62026870 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2185: 1198844-1203843 Chenopodium quinoa
AUR62026870 10.0kb upstream 10.0kb upstream 28067 true C_Quinoa_Scaffold_2185: 1170777-1198843 Chenopodium quinoa
AUR62026870 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2185: 1170777-1180776 Chenopodium quinoa
AUR62026870 10.0kb downstream 10.0kb downstream 28067 true C_Quinoa_Scaffold_2185: 1180777-1208843 Chenopodium quinoa
AUR62026870 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2185: 1198844-1208843 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123740570 5271 Pentapetalae View MSA
122787791 5272 Eudicot View MSA
122047400 5273 Angiosperm View MSA
121345484 5274 Embryophyte View MSA
123380227 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain