Gene : AUR62013142 C. quinoa v1.0

Defline:  (1 of 5) K03013 - DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RPB5, POLR2E) Genomic Order:  268
Name:  ? AUR62013142 Secondary Identifier:  ? PAC:36300157

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62013142 0.5kb upstream 0.5kb upstream 3573 true C_Quinoa_Scaffold_1040: 2630065-2633637 Chenopodium quinoa
AUR62013142 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1040: 2630065-2630564 Chenopodium quinoa
AUR62013142 0.5kb downstream 0.5kb downstream 3573 true C_Quinoa_Scaffold_1040: 2630565-2634137 Chenopodium quinoa
AUR62013142 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1040: 2633638-2634137 Chenopodium quinoa
AUR62013142 1.0kb upstream 1.0kb upstream 4073 true C_Quinoa_Scaffold_1040: 2629565-2633637 Chenopodium quinoa
AUR62013142 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1040: 2629565-2630564 Chenopodium quinoa
AUR62013142 1.0kb downstream 1.0kb downstream 4073 true C_Quinoa_Scaffold_1040: 2630565-2634637 Chenopodium quinoa
AUR62013142 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1040: 2633638-2634637 Chenopodium quinoa
AUR62013142 2.0kb upstream 2.0kb upstream 5073 true C_Quinoa_Scaffold_1040: 2628565-2633637 Chenopodium quinoa
AUR62013142 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1040: 2628565-2630564 Chenopodium quinoa
AUR62013142 2.0kb downstream 2.0kb downstream 5073 true C_Quinoa_Scaffold_1040: 2630565-2635637 Chenopodium quinoa
AUR62013142 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1040: 2633638-2635637 Chenopodium quinoa
AUR62013142 5.0kb upstream 5.0kb upstream 8073 true C_Quinoa_Scaffold_1040: 2625565-2633637 Chenopodium quinoa
AUR62013142 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1040: 2625565-2630564 Chenopodium quinoa
AUR62013142 5.0kb downstream 5.0kb downstream 8073 true C_Quinoa_Scaffold_1040: 2630565-2638637 Chenopodium quinoa
AUR62013142 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1040: 2633638-2638637 Chenopodium quinoa
AUR62013142 10.0kb upstream 10.0kb upstream 13073 true C_Quinoa_Scaffold_1040: 2620565-2633637 Chenopodium quinoa
AUR62013142 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1040: 2620565-2630564 Chenopodium quinoa
AUR62013142 10.0kb downstream 10.0kb downstream 13073 true C_Quinoa_Scaffold_1040: 2630565-2643637 Chenopodium quinoa
AUR62013142 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1040: 2633638-2643637 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123752021 5271 Pentapetalae View MSA
122793391 5272 Eudicot View MSA
122044572 5273 Angiosperm View MSA
121347059 5274 Embryophyte View MSA
123424632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain