Gene : AUR62013197 C. quinoa v1.0
Defline:  (1 of 4) K01885 - glutamyl-tRNA synthetase (EARS, gltX) Genomic Order:  323
Name:  ? AUR62013197 Secondary Identifier:  ? PAC:36299972
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-5188 Chenopodium quinoa pathologic  
Cquinoa PWY-5918 Chenopodium quinoa pathologic  
Cquinoa TRNA-CHARGING-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62013197 0.5kb upstream 0.5kb upstream 6795 true C_Quinoa_Scaffold_1040: 3087548-3094342 Chenopodium quinoa
AUR62013197 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1040: 3087548-3088047 Chenopodium quinoa
AUR62013197 0.5kb downstream 0.5kb downstream 6795 true C_Quinoa_Scaffold_1040: 3088048-3094842 Chenopodium quinoa
AUR62013197 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1040: 3094343-3094842 Chenopodium quinoa
AUR62013197 1.0kb upstream 1.0kb upstream 7295 true C_Quinoa_Scaffold_1040: 3087048-3094342 Chenopodium quinoa
AUR62013197 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1040: 3087048-3088047 Chenopodium quinoa
AUR62013197 1.0kb downstream 1.0kb downstream 7295 true C_Quinoa_Scaffold_1040: 3088048-3095342 Chenopodium quinoa
AUR62013197 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1040: 3094343-3095342 Chenopodium quinoa
AUR62013197 2.0kb upstream 2.0kb upstream 8295 true C_Quinoa_Scaffold_1040: 3086048-3094342 Chenopodium quinoa
AUR62013197 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1040: 3086048-3088047 Chenopodium quinoa
AUR62013197 2.0kb downstream 2.0kb downstream 8295 true C_Quinoa_Scaffold_1040: 3088048-3096342 Chenopodium quinoa
AUR62013197 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1040: 3094343-3096342 Chenopodium quinoa
AUR62013197 5.0kb upstream 5.0kb upstream 11295 true C_Quinoa_Scaffold_1040: 3083048-3094342 Chenopodium quinoa
AUR62013197 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1040: 3083048-3088047 Chenopodium quinoa
AUR62013197 5.0kb downstream 5.0kb downstream 11295 true C_Quinoa_Scaffold_1040: 3088048-3099342 Chenopodium quinoa
AUR62013197 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1040: 3094343-3099342 Chenopodium quinoa
AUR62013197 10.0kb upstream 10.0kb upstream 16295 true C_Quinoa_Scaffold_1040: 3078048-3094342 Chenopodium quinoa
AUR62013197 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1040: 3078048-3088047 Chenopodium quinoa
AUR62013197 10.0kb downstream 10.0kb downstream 16295 true C_Quinoa_Scaffold_1040: 3088048-3104342 Chenopodium quinoa
AUR62013197 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1040: 3094343-3104342 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123737264 5271 Pentapetalae View MSA
122787973 5272 Eudicot View MSA
122041760 5273 Angiosperm View MSA
121345245 5274 Embryophyte View MSA
123424323 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain