Gene : AUR62003680 C. quinoa v1.0
Defline:  (1 of 5) K01662 - 1-deoxy-D-xylulose-5-phosphate synthase (dxs) Genomic Order:  286
Name:  ? AUR62003680 Secondary Identifier:  ? PAC:36292439
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-7560 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62003680 0.5kb upstream 0.5kb upstream 4630 true C_Quinoa_Scaffold_2370: 3475458-3480087 Chenopodium quinoa
AUR62003680 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2370: 3479588-3480087 Chenopodium quinoa
AUR62003680 0.5kb downstream 0.5kb downstream 4630 true C_Quinoa_Scaffold_2370: 3474958-3479587 Chenopodium quinoa
AUR62003680 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2370: 3474958-3475457 Chenopodium quinoa
AUR62003680 1.0kb upstream 1.0kb upstream 5130 true C_Quinoa_Scaffold_2370: 3475458-3480587 Chenopodium quinoa
AUR62003680 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2370: 3479588-3480587 Chenopodium quinoa
AUR62003680 1.0kb downstream 1.0kb downstream 5130 true C_Quinoa_Scaffold_2370: 3474458-3479587 Chenopodium quinoa
AUR62003680 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2370: 3474458-3475457 Chenopodium quinoa
AUR62003680 2.0kb upstream 2.0kb upstream 6130 true C_Quinoa_Scaffold_2370: 3475458-3481587 Chenopodium quinoa
AUR62003680 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2370: 3479588-3481587 Chenopodium quinoa
AUR62003680 2.0kb downstream 2.0kb downstream 6130 true C_Quinoa_Scaffold_2370: 3473458-3479587 Chenopodium quinoa
AUR62003680 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2370: 3473458-3475457 Chenopodium quinoa
AUR62003680 5.0kb upstream 5.0kb upstream 9130 true C_Quinoa_Scaffold_2370: 3475458-3484587 Chenopodium quinoa
AUR62003680 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2370: 3479588-3484587 Chenopodium quinoa
AUR62003680 5.0kb downstream 5.0kb downstream 9130 true C_Quinoa_Scaffold_2370: 3470458-3479587 Chenopodium quinoa
AUR62003680 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2370: 3470458-3475457 Chenopodium quinoa
AUR62003680 10.0kb upstream 10.0kb upstream 14130 true C_Quinoa_Scaffold_2370: 3475458-3489587 Chenopodium quinoa
AUR62003680 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2370: 3479588-3489587 Chenopodium quinoa
AUR62003680 10.0kb downstream 10.0kb downstream 14130 true C_Quinoa_Scaffold_2370: 3465458-3479587 Chenopodium quinoa
AUR62003680 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2370: 3465458-3475457 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123742318 5271 Pentapetalae View MSA
122794630 5272 Eudicot View MSA
122048955 5273 Angiosperm View MSA
121351194 5274 Embryophyte View MSA
123428527 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain