Gene : AUR62028482 C. quinoa v1.0

Defline:  (1 of 2) PTHR14009//PTHR14009:SF9 - LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN // LETM1-LIKE PROTEIN Genomic Order:  71
Name:  ? AUR62028482 Secondary Identifier:  ? PAC:36296051

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62028482 0.5kb upstream 0.5kb upstream 21315 true C_Quinoa_Scaffold_3100: 5104998-5126312 Chenopodium quinoa
AUR62028482 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3100: 5104998-5105497 Chenopodium quinoa
AUR62028482 0.5kb downstream 0.5kb downstream 21315 true C_Quinoa_Scaffold_3100: 5105498-5126812 Chenopodium quinoa
AUR62028482 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3100: 5126313-5126812 Chenopodium quinoa
AUR62028482 1.0kb upstream 1.0kb upstream 21815 true C_Quinoa_Scaffold_3100: 5104498-5126312 Chenopodium quinoa
AUR62028482 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3100: 5104498-5105497 Chenopodium quinoa
AUR62028482 1.0kb downstream 1.0kb downstream 21815 true C_Quinoa_Scaffold_3100: 5105498-5127312 Chenopodium quinoa
AUR62028482 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3100: 5126313-5127312 Chenopodium quinoa
AUR62028482 2.0kb upstream 2.0kb upstream 22815 true C_Quinoa_Scaffold_3100: 5103498-5126312 Chenopodium quinoa
AUR62028482 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3100: 5103498-5105497 Chenopodium quinoa
AUR62028482 2.0kb downstream 2.0kb downstream 22815 true C_Quinoa_Scaffold_3100: 5105498-5128312 Chenopodium quinoa
AUR62028482 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3100: 5126313-5128312 Chenopodium quinoa
AUR62028482 5.0kb upstream 5.0kb upstream 25815 true C_Quinoa_Scaffold_3100: 5100498-5126312 Chenopodium quinoa
AUR62028482 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3100: 5100498-5105497 Chenopodium quinoa
AUR62028482 5.0kb downstream 5.0kb downstream 25815 true C_Quinoa_Scaffold_3100: 5105498-5131312 Chenopodium quinoa
AUR62028482 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3100: 5126313-5131312 Chenopodium quinoa
AUR62028482 10.0kb upstream 10.0kb upstream 30815 true C_Quinoa_Scaffold_3100: 5095498-5126312 Chenopodium quinoa
AUR62028482 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3100: 5095498-5105497 Chenopodium quinoa
AUR62028482 10.0kb downstream 10.0kb downstream 30815 true C_Quinoa_Scaffold_3100: 5105498-5136312 Chenopodium quinoa
AUR62028482 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3100: 5126313-5136312 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123740190 5271 Pentapetalae View MSA
122788808 5272 Eudicot View MSA
122047969 5273 Angiosperm View MSA
121348078 5274 Embryophyte View MSA
123380722 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain