Gene : AUR62001887 C. quinoa v1.0

Defline:  (1 of 2) PTHR33405:SF1 - PROTEIN FLC EXPRESSOR Genomic Order:  803
Name:  ? AUR62001887 Secondary Identifier:  ? PAC:36314238

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62001887 0.5kb upstream 0.5kb upstream 3780 true C_Quinoa_Scaffold_2716: 9617975-9621754 Chenopodium quinoa
AUR62001887 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2716: 9617975-9618474 Chenopodium quinoa
AUR62001887 0.5kb downstream 0.5kb downstream 3780 true C_Quinoa_Scaffold_2716: 9618475-9622254 Chenopodium quinoa
AUR62001887 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2716: 9621755-9622254 Chenopodium quinoa
AUR62001887 1.0kb upstream 1.0kb upstream 4280 true C_Quinoa_Scaffold_2716: 9617475-9621754 Chenopodium quinoa
AUR62001887 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2716: 9617475-9618474 Chenopodium quinoa
AUR62001887 1.0kb downstream 1.0kb downstream 4280 true C_Quinoa_Scaffold_2716: 9618475-9622754 Chenopodium quinoa
AUR62001887 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2716: 9621755-9622754 Chenopodium quinoa
AUR62001887 2.0kb upstream 2.0kb upstream 5280 true C_Quinoa_Scaffold_2716: 9616475-9621754 Chenopodium quinoa
AUR62001887 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2716: 9616475-9618474 Chenopodium quinoa
AUR62001887 2.0kb downstream 2.0kb downstream 5280 true C_Quinoa_Scaffold_2716: 9618475-9623754 Chenopodium quinoa
AUR62001887 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2716: 9621755-9623754 Chenopodium quinoa
AUR62001887 5.0kb upstream 5.0kb upstream 8280 true C_Quinoa_Scaffold_2716: 9613475-9621754 Chenopodium quinoa
AUR62001887 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2716: 9613475-9618474 Chenopodium quinoa
AUR62001887 5.0kb downstream 5.0kb downstream 8280 true C_Quinoa_Scaffold_2716: 9618475-9626754 Chenopodium quinoa
AUR62001887 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2716: 9621755-9626754 Chenopodium quinoa
AUR62001887 10.0kb upstream 10.0kb upstream 13280 true C_Quinoa_Scaffold_2716: 9608475-9621754 Chenopodium quinoa
AUR62001887 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2716: 9608475-9618474 Chenopodium quinoa
AUR62001887 10.0kb downstream 10.0kb downstream 13280 true C_Quinoa_Scaffold_2716: 9618475-9631754 Chenopodium quinoa
AUR62001887 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2716: 9621755-9631754 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026776 5273 Angiosperm View MSA
123743028 5271 Pentapetalae View MSA
122794369 5272 Eudicot View MSA
121296551 5274 Embryophyte View MSA
123334697 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain