Gene : AUR62023379 C. quinoa v1.0

Defline:  (1 of 4) PTHR31773//PTHR31773:SF11 - FAMILY NOT NAMED // METACASPASE-2 Genomic Order:  157
Name:  ? AUR62023379 Secondary Identifier:  ? PAC:36315923

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62023379 0.5kb upstream 0.5kb upstream 6596 true C_Quinoa_Scaffold_1352: 1730051-1736646 Chenopodium quinoa
AUR62023379 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1352: 1736147-1736646 Chenopodium quinoa
AUR62023379 0.5kb downstream 0.5kb downstream 6596 true C_Quinoa_Scaffold_1352: 1729551-1736146 Chenopodium quinoa
AUR62023379 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1352: 1729551-1730050 Chenopodium quinoa
AUR62023379 1.0kb upstream 1.0kb upstream 7096 true C_Quinoa_Scaffold_1352: 1730051-1737146 Chenopodium quinoa
AUR62023379 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1352: 1736147-1737146 Chenopodium quinoa
AUR62023379 1.0kb downstream 1.0kb downstream 7096 true C_Quinoa_Scaffold_1352: 1729051-1736146 Chenopodium quinoa
AUR62023379 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1352: 1729051-1730050 Chenopodium quinoa
AUR62023379 2.0kb upstream 2.0kb upstream 8096 true C_Quinoa_Scaffold_1352: 1730051-1738146 Chenopodium quinoa
AUR62023379 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1352: 1736147-1738146 Chenopodium quinoa
AUR62023379 2.0kb downstream 2.0kb downstream 8096 true C_Quinoa_Scaffold_1352: 1728051-1736146 Chenopodium quinoa
AUR62023379 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1352: 1728051-1730050 Chenopodium quinoa
AUR62023379 5.0kb upstream 5.0kb upstream 11096 true C_Quinoa_Scaffold_1352: 1730051-1741146 Chenopodium quinoa
AUR62023379 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1352: 1736147-1741146 Chenopodium quinoa
AUR62023379 5.0kb downstream 5.0kb downstream 11096 true C_Quinoa_Scaffold_1352: 1725051-1736146 Chenopodium quinoa
AUR62023379 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1352: 1725051-1730050 Chenopodium quinoa
AUR62023379 10.0kb upstream 10.0kb upstream 16096 true C_Quinoa_Scaffold_1352: 1730051-1746146 Chenopodium quinoa
AUR62023379 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1352: 1736147-1746146 Chenopodium quinoa
AUR62023379 10.0kb downstream 10.0kb downstream 16096 true C_Quinoa_Scaffold_1352: 1720051-1736146 Chenopodium quinoa
AUR62023379 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1352: 1720051-1730050 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027947 5273 Angiosperm View MSA
123753362 5271 Pentapetalae View MSA
122775074 5272 Eudicot View MSA
123428899 5275 Viridiplantae View MSA
121350269 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain