Gene : AUR62027563 C. quinoa v1.0

Defline:  (1 of 2) PTHR33596//PTHR33596:SF3 - FAMILY NOT NAMED // COLD-REGULATED 413 INNER MEMBRANE PROTEIN 1, CHLOROPLASTIC-RELATED Genomic Order:  48
Name:  ? AUR62027563 Secondary Identifier:  ? PAC:36284920

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62027563 0.5kb upstream 0.5kb upstream 4296 true C_Quinoa_Scaffold_1125: 2738139-2742434 Chenopodium quinoa
AUR62027563 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1125: 2738139-2738638 Chenopodium quinoa
AUR62027563 0.5kb downstream 0.5kb downstream 4296 true C_Quinoa_Scaffold_1125: 2738639-2742934 Chenopodium quinoa
AUR62027563 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1125: 2742435-2742934 Chenopodium quinoa
AUR62027563 1.0kb upstream 1.0kb upstream 4796 true C_Quinoa_Scaffold_1125: 2737639-2742434 Chenopodium quinoa
AUR62027563 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1125: 2737639-2738638 Chenopodium quinoa
AUR62027563 1.0kb downstream 1.0kb downstream 4796 true C_Quinoa_Scaffold_1125: 2738639-2743434 Chenopodium quinoa
AUR62027563 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1125: 2742435-2743434 Chenopodium quinoa
AUR62027563 2.0kb upstream 2.0kb upstream 5796 true C_Quinoa_Scaffold_1125: 2736639-2742434 Chenopodium quinoa
AUR62027563 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1125: 2736639-2738638 Chenopodium quinoa
AUR62027563 2.0kb downstream 2.0kb downstream 5796 true C_Quinoa_Scaffold_1125: 2738639-2744434 Chenopodium quinoa
AUR62027563 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1125: 2742435-2744434 Chenopodium quinoa
AUR62027563 5.0kb upstream 5.0kb upstream 8796 true C_Quinoa_Scaffold_1125: 2733639-2742434 Chenopodium quinoa
AUR62027563 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1125: 2733639-2738638 Chenopodium quinoa
AUR62027563 5.0kb downstream 5.0kb downstream 8796 true C_Quinoa_Scaffold_1125: 2738639-2747434 Chenopodium quinoa
AUR62027563 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1125: 2742435-2747434 Chenopodium quinoa
AUR62027563 10.0kb upstream 10.0kb upstream 13796 true C_Quinoa_Scaffold_1125: 2728639-2742434 Chenopodium quinoa
AUR62027563 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1125: 2728639-2738638 Chenopodium quinoa
AUR62027563 10.0kb downstream 10.0kb downstream 13796 true C_Quinoa_Scaffold_1125: 2738639-2752434 Chenopodium quinoa
AUR62027563 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1125: 2742435-2752434 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026496 5273 Angiosperm View MSA
123739751 5271 Pentapetalae View MSA
122786208 5272 Eudicot View MSA
121350668 5274 Embryophyte View MSA
123381843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain